Information for 6-YCTCGCTCTC (Motif 16)

G A C T A G T C A C G T G T A C A T C G A T G C A G C T G A T C C G A T G A T C
Reverse Opposite:
C T A G G C T A C T A G T C G A A T C G T A G C C A T G T G C A T C A G C T G A
p-value:1e-9
log p-value:-2.277e+01
Information Content per bp:1.625
Number of Target Sequences with motif129.0
Percentage of Target Sequences with motif16.48%
Number of Background Sequences with motif2429.4
Percentage of Background Sequences with motif9.25%
Average Position of motif in Targets51.1 +/- 28.8bp
Average Position of motif in Background49.9 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:YCTCGCTCTC------
-ACCACTCTCGGTCAC
 G A C T A G T C A C G T G T A C A T C G A T G C A G C T G A T C C G A T G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:YCTCGCTCTC---
---NSCACTYVAV
 G A C T A G T C A C G T G T A C A T C G A T G C A G C T G A T C C G A T G A T C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:YCTCGCTCTC--
--AASCACTCAA
 G A C T A G T C A C G T G T A C A T C G A T G C A G C T G A T C C G A T G A T C A C G T A C G T
A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

E2F6/MA0471.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-YCTCGCTCTC
NCTTCCCGCCC
 A C G T G A C T A G T C A C G T G T A C A T C G A T G C A G C T G A T C C G A T G A T C
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:YCTCGCTCTC---
--AGCCACTCAAG
 G A C T A G T C A C G T G T A C A T C G A T G C A G C T G A T C C G A T G A T C A C G T A C G T A C G T
A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:YCTCGCTCTC-
-CRCCCACGCA
 G A C T A G T C A C G T G T A C A T C G A T G C A G C T G A T C C G A T G A T C A C G T
A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:YCTCGCTCTC
GCTCGGSCTC
 G A C T A G T C A C G T G T A C A T C G A T G C A G C T G A T C C G A T G A T C
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

PB0139.1_Irf5_2/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:YCTCGCTCTC------
-NNAATTCTCGNTNAN
 G A C T A G T C A C G T G T A C A T C G A T G C A G C T G A T C C G A T G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

EGR1/MA0162.2/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---YCTCGCTCTC-
CCCCCGCCCCCGCC
 A C G T A C G T A C G T G A C T A G T C A C G T G T A C A T C G A T G C A G C T G A T C C G A T G A T C A C G T
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

PB0114.1_Egr1_2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--YCTCGCTCTC----
NNAGTCCCACTCNNNN
 A C G T A C G T G A C T A G T C A C G T G T A C A T C G A T G C A G C T G A T C C G A T G A T C A C G T A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A