Information for 15-GTAAGTGTTC (Motif 45)

A C T G C G A T C T G A G T C A A C T G A G C T A C T G A C G T A C G T A G T C
Reverse Opposite:
C T A G C G T A G T C A A G T C C T G A A G T C C A G T A G C T C G T A A G T C
p-value:1e-7
log p-value:-1.732e+01
Information Content per bp:1.814
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif40.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets68.4 +/- 18.3bp
Average Position of motif in Background53.7 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GTAAGTGTTC
TTAAGTGCTT
 A C T G C G A T C T G A G T C A A C T G A G C T A C T G A C G T A C G T A G T C
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GTAAGTGTTC
TTAAGTGGT-
 A C T G C G A T C T G A G T C A A C T G A G C T A C T G A C G T A C G T A G T C
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTAAGTGTTC
TTAAGTGGN-
 A C T G C G A T C T G A G T C A A C T G A G C T A C T G A C G T A C G T A G T C
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GTAAGTGTTC
CAGGTAAGTAT--
 A C G T A C G T A C G T A C T G C G A T C T G A G T C A A C T G A G C T A C T G A C G T A C G T A G T C
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTAAGTGTTC-
CGTGGGTGGTCC
 A C G T A C T G C G A T C T G A G T C A A C T G A G C T A C T G A C G T A C G T A G T C A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

PH0004.1_Nkx3-2/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GTAAGTGTTC---
NTNNTTAAGTGGTTANN
 A C G T A C G T A C G T A C G T A C T G C G A T C T G A G T C A A C T G A G C T A C T G A C G T A C G T A G T C A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTAAGTGTTC
TTRAGTGSYK
 A C T G C G A T C T G A G T C A A C T G A G C T A C T G A C G T A C G T A G T C
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTAAGTGTTC
TTGAGTGSTT
 A C T G C G A T C T G A G T C A A C T G A G C T A C T G A C G T A C G T A G T C
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTAAGTGTTC-
RGTTAGTGCCCY
 A C G T A C T G C G A T C T G A G T C A A C T G A G C T A C T G A C G T A C G T A G T C A C G T
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTAAGTGTTC
NTCAAGTGGN-
 A C G T A C T G C G A T C T G A G T C A A C T G A G C T A C T G A C G T A C G T A G T C
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T