Information for 7-GTCAAGTACC (Motif 19)

A T C G C G A T A G T C G T C A C G T A A C T G A C G T C G T A A G T C G T A C
Reverse Opposite:
A C T G A C T G A C G T C G T A A G T C G A C T A C G T A C T G G C T A A T G C
p-value:1e-9
log p-value:-2.249e+01
Information Content per bp:1.857
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif31.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets43.4 +/- 27.9bp
Average Position of motif in Background49.1 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GTCAAGTACC-----
ACTCCAAGTACTTGGAA
 A C G T A C G T A T C G C G A T A G T C G T C A C G T A A C T G A C G T C G T A A G T C G T A C A C G T A C G T A C G T A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GTCAAGTACC-
-GCACGTACCC
 A T C G C G A T A G T C G T C A C G T A A C T G A C G T C G T A A G T C G T A C A C G T
A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTCAAGTACC
AAGGCAAGTGT-
 A C G T A C G T A T C G C G A T A G T C G T C A C G T A A C T G A C G T C G T A A G T C G T A C
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

HES5/MA0821.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTCAAGTACC-
CGGCACGTGCCA
 A C G T A T C G C G A T A G T C G T C A C G T A A C T G A C G T C G T A A G T C G T A C A C G T
G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A

NKX2-8/MA0673.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTCAAGTACC
NTCAAGTGG-
 A T C G C G A T A G T C G T C A C G T A A C T G A C G T C G T A A G T C G T A C
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T

HES7/MA0822.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTCAAGTACC-
TGGCACGTGCCA
 A C G T A T C G C G A T A G T C G T C A C G T A A C T G A C G T C G T A A G T C G T A C A C G T
G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A

PH0116.1_Nkx2-9/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTCAAGTACC-----
NATTTAAGTACTTNAAA
 A C G T A C G T A T C G C G A T A G T C G T C A C G T A A C T G A C G T C G T A A G T C G T A C A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

PH0112.1_Nkx2-3/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTCAAGTACC-----
CNTTAAGTACTTAANG
 A C G T A T C G C G A T A G T C G T C A C G T A A C T G A C G T C G T A A G T C G T A C A C G T A C G T A C G T A C G T A C G T
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTCAAGTACC---
NGNTCTAGAACCNGV
 A C G T A C G T A T C G C G A T A G T C G T C A C G T A A C T G A C G T C G T A A G T C G T A C A C G T A C G T A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

PH0117.1_Nkx3-1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTCAAGTACC-----
NATTTAAGTACTTANNA
 A C G T A C G T A T C G C G A T A G T C G T C A C G T A A C T G A C G T C G T A A G T C G T A C A C G T A C G T A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A