Information for 5-YTGTTTRCAT (Motif 17)

G A T C C G A T A C T G C G A T A G C T C A G T C T A G A G T C G C T A A G C T
Reverse Opposite:
C T G A C G A T A C T G A G T C G T C A C T G A C G T A A G T C C G T A C T A G
p-value:1e-9
log p-value:-2.261e+01
Information Content per bp:1.727
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif5.04%
Number of Background Sequences with motif752.7
Percentage of Background Sequences with motif1.54%
Average Position of motif in Targets51.1 +/- 28.8bp
Average Position of motif in Background51.4 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP2/MA0593.1/Jaspar

Match Rank:1
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-YTGTTTRCAT
TNTGTTTACTT
 A C G T G A T C C G A T A C T G C G A T A G C T C A G T C T A G A G T C G C T A A G C T
G A C T A G C T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C A T G A C T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:2
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-YTGTTTRCAT-
CNTGTTTACATA
 A C G T G A T C C G A T A C T G C G A T A G C T C A G T C T A G A G T C G C T A A G C T A C G T
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:YTGTTTRCAT-
-TGTTTACTTT
 G A T C C G A T A C T G C G A T A G C T C A G T C T A G A G T C G C T A A G C T A C G T
A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1/MA0148.3/Jaspar

Match Rank:4
Score:0.86
Offset:-3
Orientation:forward strand
Alignment:---YTGTTTRCAT--
TCCATGTTTACTTTG
 A C G T A C G T A C G T G A T C C G A T A C T G C G A T A G C T C A G T C T A G A G T C G C T A A G C T A C G T A C G T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:5
Score:0.86
Offset:0
Orientation:forward strand
Alignment:YTGTTTRCAT
CTGTTTAC--
 G A T C C G A T A C T G C G A T A G C T C A G T C T A G A G T C G C T A A G C T
A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C A C G T A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:6
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--YTGTTTRCAT
TCCTGTTTACA-
 A C G T A C G T G A T C C G A T A C T G C G A T A G C T C A G T C T A G A G T C G C T A A G C T
C A G T A T G C A G T C A C G T A C T G A C G T A C G T A C G T G C T A A G T C G C T A A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:7
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--YTGTTTRCAT
SCHTGTTTACAT
 A C G T A C G T G A T C C G A T A C T G C G A T A G C T C A G T C T A G A G T C G C T A A G C T
T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:8
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:YTGTTTRCAT-
-TGTTTACTTT
 G A T C C G A T A C T G C G A T A G C T C A G T C T A G A G T C G C T A A G C T A C G T
A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:9
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:YTGTTTRCAT
-TGTTTACH-
 G A T C C G A T A C T G C G A T A G C T C A G T C T A G A G T C G C T A A G C T
A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G C T A A C G T

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:10
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--YTGTTTRCAT
NYYTGTTTACHN
 A C G T A C G T G A T C C G A T A C T G C G A T A G C T C A G T C T A G A G T C G C T A A G C T
A G C T A G T C A G T C A C G T C T A G A C G T A C G T A C G T C G T A A G T C G A T C C G T A