Information for 7-ATGCAGWCACTAG (Motif 12)

C T G A A C G T A C T G G T A C C G T A A C T G C G T A A G T C C T G A A G T C A G C T C T G A A C T G
Reverse Opposite:
A G T C A G C T C T G A T A C G A G C T A C T G G C A T A G T C C G A T A C T G A G T C C G T A A G C T
p-value:1e-10
log p-value:-2.419e+01
Information Content per bp:1.817
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif19.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets67.8 +/- 19.1bp
Average Position of motif in Background46.8 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATGCAGWCACTAG-
CAAATCCAGACATCACA
 A C G T A C G T A C G T C T G A A C G T A C T G G T A C C G T A A C T G C G T A A G T C C T G A A G T C A G C T C T G A A C T G A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

JUN/MA0488.1/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATGCAGWCACTAG
AAGATGATGTCAT---
 A C G T A C G T A C G T C T G A A C G T A C T G G T A C C G T A A C T G C G T A A G T C C T G A A G T C A G C T C T G A A C T G
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ATGCAGWCACTAG
--CCAGACAG---
 C T G A A C G T A C T G G T A C C G T A A C T G C G T A A G T C C T G A A G T C A G C T C T G A A C T G
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ATGCAGWCACTAG
ATTTGCATACAATGG
 A C G T A C G T C T G A A C G T A C T G G T A C C G T A A C T G C G T A A G T C C T G A A G T C A G C T C T G A A C T G
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ATGCAGWCACTAG
ATGACGTCAYYN-
 C T G A A C G T A C T G G T A C C G T A A C T G C G T A A G T C C T G A A G T C A G C T C T G A A C T G
T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G A C G T

Creb5/MA0840.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ATGCAGWCACTAG
AATGACGTCACC--
 A C G T C T G A A C G T A C T G G T A C C G T A A C T G C G T A A G T C C T G A A G T C A G C T C T G A A C T G
T C G A T C G A G A C T C A T G C G T A A G T C C T A G G C A T G T A C C G T A A G T C G A T C A C G T A C G T

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ATGCAGWCACTAG
ATGACGTCATCN-
 C T G A A C G T A C T G G T A C C G T A A C T G C G T A A G T C C T G A A G T C A G C T C T G A A C T G
T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T G A T C T C G A A C G T

JDP2(var.2)/MA0656.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ATGCAGWCACTAG
GATGACGTCATC--
 A C G T C T G A A C G T A C T G G T A C C G T A A C T G C G T A A G T C C T G A A G T C A G C T C T G A A C T G
T A C G T C G A A G C T C A T G G T C A A G T C T C A G G A C T T G A C T G C A A G C T T G A C A C G T A C G T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ATGCAGWCACTAG
NGRTGACGTCAY---
 A C G T A C G T C T G A A C G T A C T G G T A C C G T A A C T G C G T A A G T C C T G A A G T C A G C T C T G A A C T G
T A G C C T A G T C G A G A C T A C T G C T G A A G T C T C A G G C A T T G A C C T G A A G C T A C G T A C G T A C G T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ATGCAGWCACTAG
NGATGACGTCAT---
 A C G T A C G T C T G A A C G T A C T G G T A C C G T A A C T G C G T A A G T C C T G A A G T C A G C T C T G A A C T G
C T A G T C A G T C G A C G A T C A T G C T G A A G T C T C A G G A C T T G A C C G T A A G C T A C G T A C G T A C G T