Information for 6-KAATTATCTGATT (Motif 8)

C A G T C G T A C G T A G A C T A G C T C G T A A C G T A T G C C G A T T A C G G T C A A C G T A C G T
Reverse Opposite:
C G T A C G T A C A G T A T G C C G T A A T C G G T C A A C G T C T G A C T G A A C G T A C G T G T C A
p-value:1e-12
log p-value:-2.951e+01
Information Content per bp:1.824
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.9 +/- 31.2bp
Average Position of motif in Background64.1 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.79
Offset:-5
Orientation:reverse strand
Alignment:-----KAATTATCTGATT--
HWWNNTAATTRGCHAATTAN
 A C G T A C G T A C G T A C G T A C G T C A G T C G T A C G T A G A C T A G C T C G T A A C G T A T G C C G A T T A C G G T C A A C G T A C G T A C G T A C G T
G C A T C G A T C G A T C A G T G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A C G A T A G C T C T G A C T A G

Hoxb5/MA0904.1/Jaspar

Match Rank:2
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----KAATTATCTGATT
ACGGTAATTAGCTCAT-
 A C G T A C G T A C G T A C G T C A G T C G T A C G T A G A C T A G C T C G T A A C G T A T G C C G A T T A C G G T C A A C G T A C G T
T G C A G T A C C T A G A C T G G A C T G T C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A G C A T A C G T

PH0060.1_Hoxb5/Jaspar

Match Rank:3
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----KAATTATCTGATT
ACGGTAATTAGCTCAT-
 A C G T A C G T A C G T A C G T C A G T C G T A C G T A G A C T A G C T C G T A A C G T A T G C C G A T T A C G G T C A A C G T A C G T
T G C A G T A C C T A G A C T G G A C T G T C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A G C A T A C G T

PH0036.1_Gsx2/Jaspar

Match Rank:4
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----KAATTATCTGATT
AGGTTAATTAGCTGAT-
 A C G T A C G T A C G T A C G T C A G T C G T A C G T A G A C T A G C T C G T A A C G T A T G C C G A T T A C G G T C A A C G T A C G T
T C G A T A C G C T A G A G C T G A C T G T C A C G T A C G A T A C G T C T G A T C A G G A T C A G C T A T C G C T G A C A G T A C G T

PH0081.1_Pdx1/Jaspar

Match Rank:5
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----KAATTATCTGATT
AAGGTAATTAGCTCAT-
 A C G T A C G T A C G T A C G T C A G T C G T A C G T A G A C T A G C T C G T A A C G T A T G C C G A T T A C G G T C A A C G T A C G T
T G C A T G C A C T A G A T C G G A C T T G C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T T A G C C G T A C A G T A C G T

Dlx1/MA0879.1/Jaspar

Match Rank:6
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--KAATTATCTGATT
CCTAATTATC-----
 A C G T A C G T C A G T C G T A C G T A G A C T A G C T C G T A A C G T A T G C C G A T T A C G G T C A A C G T A C G T
T G A C T G A C G A C T T G C A G C T A C G A T A C G T G C T A A C G T A T G C A C G T A C G T A C G T A C G T A C G T

PH0049.1_Hoxa2/Jaspar

Match Rank:7
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----KAATTATCTGATT
AAGGTAATTAGCTCAT-
 A C G T A C G T A C G T A C G T C A G T C G T A C G T A G A C T A G C T C G T A A C G T A T G C C G A T T A C G G T C A A C G T A C G T
C T G A T G C A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A T A C G G A T C G A C T G T A C C G T A C G A T A C G T

PH0045.1_Hoxa1/Jaspar

Match Rank:8
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----KAATTATCTGATT
ACGGTAATTAGCTCAG-
 A C G T A C G T A C G T A C G T C A G T C G T A C G T A G A C T A G C T C G T A A C G T A T G C C G A T T A C G G T C A A C G T A C G T
T C G A T G A C C T A G A C T G A G C T G T C A C G T A A C G T A C G T C T G A T A C G A G T C G A C T G A T C C T G A C T A G A C G T

PB0031.1_Hoxa3_1/Jaspar

Match Rank:9
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--KAATTATCTGATT
GTTAATTANCTCNN-
 A C G T A C G T C A G T C G T A C G T A G A C T A G C T C G T A A C G T A T G C C G A T T A C G G T C A A C G T A C G T
T C A G A G C T A G C T G T C A C G T A A C G T A C G T C T G A T A G C G A T C C G A T T A G C T G A C G C T A A C G T

PH0009.1_Bsx/Jaspar

Match Rank:10
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----KAATTATCTGATT
CAGGTAATTACCTCAG-
 A C G T A C G T A C G T A C G T C A G T C G T A C G T A G A C T A G C T C G T A A C G T A T G C C G A T T A C G G T C A A C G T A C G T
T G A C T G C A C T A G C A T G G A C T T G C A G T C A A C G T A C G T C T G A A T G C G A T C A G C T T A G C C T G A C T A G A C G T