Information for 6-GTAAAAGCAC (Motif 17)

T A C G A C G T C G T A C G T A G T C A C G T A A C T G A G T C C G T A A T G C
Reverse Opposite:
A T C G A C G T C T A G A G T C G C A T A C G T A C G T A C G T C G T A A T G C
p-value:1e-9
log p-value:-2.166e+01
Information Content per bp:1.854
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif56.3
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets54.0 +/- 22.1bp
Average Position of motif in Background43.0 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GTAAAAGCAC
GNCTATAAAAGG--
 A C G T A C G T A C G T A C G T T A C G A C G T C G T A C G T A G T C A C G T A A C T G A G T C C G T A A T G C
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTAAAAGCAC
GCTAATTGCT-
 A C G T T A C G A C G T C G T A C G T A G T C A C G T A A C T G A G T C C G T A A T G C
A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GTAAAAGCAC
NGYCATAAAWCH--
 A C G T A C G T A C G T A C G T T A C G A C G T C G T A C G T A G T C A C G T A A C T G A G T C C G T A A T G C
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTAAAAGCAC
GCTAAACGGT-
 A C G T T A C G A C G T C G T A C G T A G T C A C G T A A C T G A G T C C G T A A T G C
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GTAAAAGCAC
NCYAATAAAA----
 A C G T A C G T A C G T A C G T T A C G A C G T C G T A C G T A G T C A C G T A A C T G A G T C C G T A A T G C
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTAAAAGCAC---
GTATAAAAGGCGGGG
 A C G T A C G T T A C G A C G T C G T A C G T A G T C A C G T A A C T G A G T C C G T A A T G C A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTAAAAGCAC---
GTATAAAAGGCGGGG
 A C G T A C G T T A C G A C G T C G T A C G T A G T C A C G T A A C T G A G T C C G T A A T G C A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

HOXC12/MA0906.1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GTAAAAGCAC
GGTCGTAAAAA---
 A C G T A C G T A C G T A C G T T A C G A C G T C G T A C G T A G T C A C G T A A C T G A G T C C G T A A T G C
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GTAAAAGCAC
CCYMATAAAA----
 A C G T A C G T A C G T A C G T T A C G A C G T C G T A C G T A G T C A C G T A A C T G A G T C C G T A A T G C
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GTAAAAGCAC
GCTCGTAAAAA---
 A C G T A C G T A C G T A C G T T A C G A C G T C G T A C G T A G T C A C G T A A C T G A G T C C G T A A T G C
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T A C G T A C G T