Information for 9-CAGKCACCTCCHG (Motif 14)

A G T C T C G A A C T G C A G T A G T C T G C A A G T C A T G C A C G T A T G C A G T C G A T C A C T G
Reverse Opposite:
G T A C C T A G A C T G A T C G C G T A A T C G A C T G A C G T A C T G G T C A A G T C A G C T A C T G
p-value:1e-10
log p-value:-2.436e+01
Information Content per bp:1.787
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif98.0
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets51.6 +/- 20.5bp
Average Position of motif in Background48.4 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CAGKCACCTCCHG
-SNGCACCTGCHS
 A G T C T C G A A C T G C A G T A G T C T G C A A G T C A T G C A C G T A T G C A G T C G A T C A C T G
A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAGKCACCTCCHG---
-GGCCYCCTGCTGDGH
 A G T C T C G A A C T G C A G T A G T C T G C A A G T C A T G C A C G T A T G C A G T C G A T C A C T G A C G T A C G T A C G T
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CAGKCACCTCCHG--
---CCCCCTGCTGTG
 A G T C T C G A A C T G C A G T A G T C T G C A A G T C A T G C A C G T A T G C A G T C G A T C A C T G A C G T A C G T
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CAGKCACCTCCHG
--NNCACCTGNN-
 A G T C T C G A A C T G C A G T A G T C T G C A A G T C A T G C A C G T A T G C A G T C G A T C A C T G
A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CAGKCACCTCCHG
NNGGCGACACCTCNNN
 A C G T A C G T A C G T A G T C T C G A A C T G C A G T A G T C T G C A A G T C A T G C A C G T A T G C A G T C G A T C A C T G
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CAGKCACCTCCHG-
----CACTTCCTGT
 A G T C T C G A A C T G C A G T A G T C T G C A A G T C A T G C A C G T A T G C A G T C G A T C A C T G A C G T
A C G T A C G T A C G T A C G T A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CAGKCACCTCCHG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A G T C T C G A A C T G C A G T A G T C T G C A A G T C A T G C A C G T A T G C A G T C G A T C A C T G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

ID4/MA0824.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CAGKCACCTCCHG
--TACACCTGTC-
 A G T C T C G A A C T G C A G T A G T C T G C A A G T C A T G C A C G T A T G C A G T C G A T C A C T G
A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CAGKCACCTCCHG
---NCACCTGTN-
 A G T C T C G A A C T G C A G T A G T C T G C A A G T C A T G C A C G T A T G C A G T C G A T C A C T G
A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T

HES5/MA0821.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAGKCACCTCCHG
-TGGCACGTGCCG
 A G T C T C G A A C T G C A G T A G T C T G C A A G T C A T G C A C G T A T G C A G T C G A T C A C T G
A C G T G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G