Information for 3-CCCMGSGCGGGGGCCV (Motif 5)

A G T C A G T C A T G C G T A C T A C G T A G C A T C G A G T C A C T G A T C G A C T G A C T G A T C G G T A C G T A C T G A C
Reverse Opposite:
A C T G C A T G C A T G A T G C G T A C A G T C A T G C G T A C C T A G A T G C A T C G A T G C A C T G A T C G A C T G C T A G
p-value:1e-14
log p-value:-3.364e+01
Information Content per bp:1.714
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.82%
Number of Background Sequences with motif135.0
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets54.1 +/- 19.1bp
Average Position of motif in Background48.8 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0101.1_Zic1_1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CCCMGSGCGGGGGCCV
CACCCCCGGGGGGG----
 A C G T A C G T A G T C A G T C A T G C G T A C T A C G T A G C A T C G A G T C A C T G A T C G A C T G A C T G A T C G G T A C G T A C T G A C
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCCMGSGCGGGGGCCV
CCCCCCCGGGGGGGT--
 A C G T A G T C A G T C A T G C G T A C T A C G T A G C A T C G A G T C A C T G A T C G A C T G A C T G A T C G G T A C G T A C T G A C
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCCMGSGCGGGGGCCV
CCCCCCCGGGGGGGT--
 A C G T A G T C A G T C A T G C G T A C T A C G T A G C A T C G A G T C A C T G A T C G A C T G A C T G A T C G G T A C G T A C T G A C
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCCMGSGCGGGGGCCV
GACCCCCCGCTGTG----
 A C G T A C G T A G T C A G T C A T G C G T A C T A C G T A G C A T C G A G T C A C T G A T C G A C T G A C T G A T C G G T A C G T A C T G A C
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCCMGSGCGGGGGCCV
GACCCCCCGCTGCGC---
 A C G T A C G T A G T C A G T C A T G C G T A C T A C G T A G C A T C G A G T C A C T G A T C G A C T G A C T G A T C G G T A C G T A C T G A C
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCMGSGCGGGGGCCV
GACCCCCCGCTGTGC---
 A C G T A C G T A G T C A G T C A T G C G T A C T A C G T A G C A T C G A G T C A C T G A T C G A C T G A C T G A T C G G T A C G T A C T G A C
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CCCMGSGCGGGGGCCV
----GGGCGGGACC--
 A G T C A G T C A T G C G T A C T A C G T A G C A T C G A G T C A C T G A T C G A C T G A C T G A T C G G T A C G T A C T G A C
A C G T A C G T A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCCMGSGCGGGGGCCV
--GGGGGCGGGGCC--
 A G T C A G T C A T G C G T A C T A C G T A G C A T C G A G T C A C T G A T C G A C T G A C T G A T C G G T A C G T A C T G A C
A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CCCMGSGCGGGGGCCV
---GGGGNGGGGC---
 A G T C A G T C A T G C G T A C T A C G T A G C A T C G A G T C A C T G A T C G A C T G A C T G A T C G G T A C G T A C T G A C
A C G T A C G T A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CCCMGSGCGGGGGCCV-
---ANTGCGGGGGCGGN
 A G T C A G T C A T G C G T A C T A C G T A G C A T C G A G T C A C T G A T C G A C T G A C T G A T C G G T A C G T A C T G A C A C G T
A C G T A C G T A C G T G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A