Information for 20-AGWAGRGKTRGAT (Motif 40)

C G T A A C T G C G A T C T G A A C T G C T G A A C T G A C T G A C G T C T A G A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A G T C C G T A G T A C G T A C A G C T A G T C A G C T C G T A A G T C A C G T
p-value:1e-6
log p-value:-1.418e+01
Information Content per bp:1.873
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.6 +/- 27.2bp
Average Position of motif in Background69.0 +/- 7.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:AGWAGRGKTRGAT
-------GTGGAT
 C G T A A C T G C G A T C T G A A C T G C T G A A C T G A C T G A C G T C T A G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:2
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AGWAGRGKTRGAT---
TGCGGAGTGGGACTGG
 C G T A A C T G C G A T C T G A A C T G C T G A A C T G A C T G A C G T C T A G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:3
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AGWAGRGKTRGAT
-GGAGGGGGAA--
 C G T A A C T G C G A T C T G A A C T G C T G A A C T G A C T G A C G T C T A G A C T G C G T A A C G T
A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:4
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-AGWAGRGKTRGAT--
NNTNAGGGGCGGNNNN
 A C G T C G T A A C T G C G A T C T G A A C T G C T G A A C T G A C T G A C G T C T A G A C T G C G T A A C G T A C G T A C G T
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:5
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:AGWAGRGKTRGAT---
----ATGATKGATGRC
 C G T A A C T G C G A T C T G A A C T G C T G A A C T G A C T G A C G T C T A G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:AGWAGRGKTRGAT
NGAAGC-------
 C G T A A C T G C G A T C T G A A C T G C T G A A C T G A C T G A C G T C T A G A C T G C G T A A C G T
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:7
Score:0.48
Offset:8
Orientation:reverse strand
Alignment:AGWAGRGKTRGAT---
--------NGGATTAN
 C G T A A C T G C G A T C T G A A C T G C T G A A C T G A C T G A C G T C T A G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

PB0137.1_Irf3_2/Jaspar

Match Rank:8
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--AGWAGRGKTRGAT
GGAGAAAGGTGCGA-
 A C G T A C G T C G T A A C T G C G A T C T G A A C T G C T G A A C T G A C T G A C G T C T A G A C T G C G T A A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.48
Offset:4
Orientation:forward strand
Alignment:AGWAGRGKTRGAT---
----NNTGTGGATTSS
 C G T A A C T G C G A T C T G A A C T G C T G A A C T G A C T G A C G T C T A G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.47
Offset:6
Orientation:reverse strand
Alignment:AGWAGRGKTRGAT----
------TGTGGATTNNN
 C G T A A C T G C G A T C T G A A C T G C T G A A C T G A C T G A C G T C T A G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A