Information for 19-CCACAGGGGAGAT (Motif 39)

A T G C G T A C C G T A A G T C C T G A A C T G A C T G C T A G A C T G C G T A A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A C G T A G T C A G T C A G T C A G T C A G C T A C T G A C G T C A T G A T C G
p-value:1e-6
log p-value:-1.418e+01
Information Content per bp:1.936
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.3 +/- 20.8bp
Average Position of motif in Background16.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCACAGGGGAGAT
GTCCCCAGGGGA---
 A C G T A C G T A T G C G T A C C G T A A G T C C T G A A C T G A C T G C T A G A C T G C G T A A C T G C G T A A C G T
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCACAGGGGAGAT
---CAGGTGAGG-
 A T G C G T A C C G T A A G T C C T G A A C T G A C T G C T A G A C T G C G T A A C T G C G T A A C G T
A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCACAGGGGAGAT-
TGCGCATAGGGGAGGAG
 A C G T A C G T A C G T A T G C G T A C C G T A A G T C C T G A A C T G A C T G C T A G A C T G C G T A A C T G C G T A A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CCACAGGGGAGAT
----TGGGGA---
 A T G C G T A C C G T A A G T C C T G A A C T G A C T G C T A G A C T G C G T A A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCACAGGGGAGAT
-CACAGN------
 A T G C G T A C C G T A A G T C C T G A A C T G A C T G C T A G A C T G C G T A A C T G C G T A A C G T
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGGGGAGAT
AAACCACAGAN-----
 A C G T A C G T A C G T A T G C G T A C C G T A A G T C C T G A A C T G A C T G C T A G A C T G C G T A A C T G C G T A A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCACAGGGGAGAT--
ATCCACAGGTGCGAAAA
 A C G T A C G T A T G C G T A C C G T A A G T C C T G A A C T G A C T G C T A G A C T G C G T A A C T G C G T A A C G T A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCACAGGGGAGAT
GCCTCAGGGCAT--
 A C G T A T G C G T A C C G T A A G T C C T G A A C T G A C T G C T A G A C T G C G T A A C T G C G T A A C G T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGGGGAGAT
AAACCACAGC------
 A C G T A C G T A C G T A T G C G T A C C G T A A G T C C T G A A C T G A C T G C T A G A C T G C G T A A C T G C G T A A C G T
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCACAGGGGAGAT
ATTCCCTGAGGGGAA--
 A C G T A C G T A C G T A C G T A T G C G T A C C G T A A G T C C T G A A C T G A C T G C T A G A C T G C G T A A C T G C G T A A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A A C G T A C G T