Information for 5-ADGMTGYTVTCWCHAR (Motif 9)

G T C A C G T A C T A G G T C A A G C T C T A G A G T C C G A T T A C G A G C T G T A C G C T A T G A C G C T A C T G A T C G A
Reverse Opposite:
A G C T G A C T C G A T A C T G C G A T A C T G T C G A A T G C G C T A C T A G A G T C C T G A A C G T G A T C G C A T C A G T
p-value:1e-12
log p-value:-2.931e+01
Information Content per bp:1.558
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif5.27%
Number of Background Sequences with motif553.5
Percentage of Background Sequences with motif1.17%
Average Position of motif in Targets46.5 +/- 25.6bp
Average Position of motif in Background50.2 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ADGMTGYTVTCWCHAR
AGATGCTRCTRCCHT---
 A C G T A C G T G T C A C G T A C T A G G T C A A G C T C T A G A G T C C G A T T A C G A G C T G T A C G C T A T G A C G C T A C T G A T C G A
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T A C G T A C G T A C G T

ATF4/MA0833.1/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ADGMTGYTVTCWCHAR
GGATGATGCAATA-----
 A C G T A C G T G T C A C G T A C T A G G T C A A G C T C T A G A G T C C G A T T A C G A G C T G T A C G C T A T G A C G C T A C T G A T C G A
C T A G C A T G T G C A A C G T C T A G C G T A A G C T C A T G G A T C G T C A G C T A A G C T T G C A A C G T A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:ADGMTGYTVTCWCHAR
CAGCTGNT--------
 G T C A C G T A C T A G G T C A A G C T C T A G A G T C C G A T T A C G A G C T G T A C G C T A T G A C G C T A C T G A T C G A
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:ADGMTGYTVTCWCHAR
MTGATGCAAT------
 G T C A C G T A C T A G G T C A A G C T C T A G A G T C C G A T T A C G A G C T G T A C G C T A T G A C G C T A C T G A T C G A
T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:ADGMTGYTVTCWCHAR
ATGATGCAAT------
 G T C A C G T A C T A G G T C A A G C T C T A G A G T C C G A T T A C G A G C T G T A C G C T A T G A C G C T A C T G A T C G A
T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:ADGMTGYTVTCWCHAR-
AAGACGCTGTAAAGCGA
 G T C A C G T A C T A G G T C A A G C T C T A G A G T C C G A T T A C G A G C T G T A C G C T A T G A C G C T A C T G A T C G A A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:ADGMTGYTVTCWCHAR-
AAGACGCTGTAAAGCGA
 G T C A C G T A C T A G G T C A A G C T C T A G A G T C C G A T T A C G A G C T G T A C G C T A T G A C G C T A C T G A T C G A A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--ADGMTGYTVTCWCHAR--
NDBAGATRWTATCTVNNNNN
 A C G T A C G T G T C A C G T A C T A G G T C A A G C T C T A G A G T C C G A T T A C G A G C T G T A C G C T A T G A C G C T A C T G A T C G A A C G T A C G T
C G T A C A G T A T G C C G T A A C T G C G T A A C G T T C G A G C T A G A C T C G T A A C G T A G T C C G A T T A C G G C A T A G C T G A T C G A C T G A C T

PH0158.1_Rhox11_2/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:ADGMTGYTVTCWCHAR-
AGGACGCTGTAAAGGGA
 G T C A C G T A C T A G G T C A A G C T C T A G A G T C C G A T T A C G A G C T G T A C G C T A T G A C G C T A C T G A T C G A A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:ADGMTGYTVTCWCHAR
-AGATGCAATCCC---
 G T C A C G T A C T A G G T C A A G C T C T A G A G T C C G A T T A C G A G C T G T A C G C T A T G A C G C T A C T G A T C G A
A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T A C G T A C G T