Information for 20-GGTTTTGTTGGCA (Motif 45)

A C T G A C T G A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C T G T C A G A T G C C G T A
Reverse Opposite:
A C G T A T C G A G T C A G T C C G T A C G T A A G T C C G T A C G T A C G T A C G T A A G T C A G T C
p-value:1e-6
log p-value:-1.453e+01
Information Content per bp:1.938
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.8 +/- 27.5bp
Average Position of motif in Background69.3 +/- 14.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13/MA0901.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GGTTTTGTTGGCA
-NTTTTATTGG--
 A C T G A C T G A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C T G T C A G A T G C C G T A
A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGTTTTGTTGGCA-
NNANTTTTATTGGNNN
 A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C T G T C A G A T G C C G T A A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

HOXA13/MA0650.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGTTTTGTTGGCA
-TTTTTATTGG--
 A C T G A C T G A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C T G T C A G A T G C C G T A
A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGTTTTGTTGGCA
-NTTTTATTGG--
 A C T G A C T G A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C T G T C A G A T G C C G T A
A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:GGTTTTGTTGGCA--
-----NNTTGGCANN
 A C T G A C T G A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C T G T C A G A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GGTTTTGTTGGCA-
-----GGTTGGCAT
 A C T G A C T G A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C T G T C A G A T G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGTTTTGTTGGCA
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C T G T C A G A T G C C G T A
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

PH0057.1_Hoxb13/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGTTTTGTTGGCA-
NNAATTTTATTGGNTN
 A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C T G T C A G A T G C C G T A A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGTTTTGTTGGCA
--TTTTATKRGG-
 A C T G A C T G A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C T G T C A G A T G C C G T A
A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:GGTTTTGTTGGCA--
------NTTGGCANN
 A C T G A C T G A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C T G T C A G A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G