Information for 10-AAGGTGACCC (Motif 41)

C G T A T C G A C T A G A C T G G A C T C T A G C G T A A T G C A G T C G T A C
Reverse Opposite:
A C T G C T A G A T C G C G A T A G T C C T G A G T A C A G T C A G C T G A C T
p-value:1e-8
log p-value:-1.893e+01
Information Content per bp:1.821
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.34%
Number of Background Sequences with motif168.8
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets54.4 +/- 26.8bp
Average Position of motif in Background48.6 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:AAGGTGACCC------
NNNNTGACCCGGCGCG
 C G T A T C G A C T A G A C T G G A C T C T A G C G T A A T G C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

PB0030.1_Hnf4a_1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AAGGTGACCC------
NNANTTGACCCCTNNNN
 A C G T C G T A T C G A C T A G A C T G G A C T C T A G C G T A A T G C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:AAGGTGACCC
----TGACCT
 C G T A T C G A C T A G A C T G G A C T C T A G C G T A A T G C A G T C G T A C
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

PB0157.1_Rara_2/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AAGGTGACCC------
NNCNTGACCCCGCTCT
 C G T A T C G A C T A G A C T G G A C T C T A G C G T A A T G C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

PB0057.1_Rxra_1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AAGGTGACCC------
TGTCGTGACCCCTTAAT
 A C G T C G T A T C G A C T A G A C T G G A C T C T A G C G T A A T G C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:AAGGTGACCC--
----TGACCYCT
 C G T A T C G A C T A G A C T G G A C T C T A G C G T A A T G C A G T C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AAGGTGACCC
AAGGTCAC--
 C G T A T C G A C T A G A C T G G A C T C T A G C G T A A T G C A G T C G T A C
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:8
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----AAGGTGACCC
AGGNCANNGTGACCT
 A C G T A C G T A C G T A C G T A C G T C G T A T C G A C T A G A C T G G A C T C T A G C G T A A T G C A G T C G T A C
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AAGGTGACCC
TCAAGGTCAN--
 A C G T A C G T C G T A T C G A C T A G A C T G G A C T C T A G C G T A A T G C A G T C G T A C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:10
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AAGGTGACCC-
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A C G T A C G T C G T A T C G A C T A G A C T G G A C T C T A G C G T A A T G C A G T C G T A C A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G