Information for 20-TGTGAGGTTTTRWTGA (Motif 40)

A C G T A C T G C A G T A C T G C G T A A T C G A C T G A G C T G A C T C G A T A C G T C T G A C G T A A C G T C A T G G T C A
Reverse Opposite:
A C G T G T A C G T C A C G A T A G C T G T C A C G T A C G T A C T G A G T A C A T G C G C A T A G T C G C T A G T A C C G T A
p-value:1e-8
log p-value:-1.912e+01
Information Content per bp:1.711
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.3 +/- 24.9bp
Average Position of motif in Background64.2 +/- 12.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX3/MA0684.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGTGAGGTTTTRWTGA
TTTGCGGTTT------
 A C G T A C T G C A G T A C T G C G T A A T C G A C T G A G C T G A C T C G A T A C G T C T G A C G T A A C G T C A T G G T C A
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGTGAGGTTTTRWTGA
NNTGTGGTTT------
 A C G T A C T G C A G T A C T G C G T A A T C G A C T G A G C T G A C T C G A T A C G T C T G A C G T A A C G T C A T G G T C A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGTGAGGTTTTRWTGA
GTCTGTGGTTT------
 A C G T A C G T A C T G C A G T A C T G C G T A A T C G A C T G A G C T G A C T C G A T A C G T C T G A C G T A A C G T C A T G G T C A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGTGAGGTTTTRWTGA
NNHTGTGGTTWN-----
 A C G T A C G T A C T G C A G T A C T G C G T A A T C G A C T G A G C T G A C T C G A T A C G T C T G A C G T A A C G T C A T G G T C A
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGTGAGGTTTTRWTGA
-TTGCGGTTT------
 A C G T A C T G C A G T A C T G C G T A A T C G A C T G A G C T G A C T C G A T A C G T C T G A C G T A A C G T C A T G G T C A
A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGTGAGGTTTTRWTGA
-CTGTGGTTTN-----
 A C G T A C T G C A G T A C T G C G T A A T C G A C T G A G C T G A C T C G A T A C G T C T G A C G T A A C G T C A T G G T C A
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGTGAGGTTTTRWTGA
GCTGTGGTTT------
 A C G T A C T G C A G T A C T G C G T A A T C G A C T G A G C T G A C T C G A T A C G T C T G A C G T A A C G T C A T G G T C A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGTGAGGTTTTRWTGA
CTTGAGTGGCT-------
 A C G T A C G T A C G T A C T G C A G T A C T G C G T A A T C G A C T G A G C T G A C T C G A T A C G T C T G A C G T A A C G T C A T G G T C A
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0150.1_Pou4f3/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TGTGAGGTTTTRWTGA----
----AGTTATTAATGAGGTC
 A C G T A C T G C A G T A C T G C G T A A T C G A C T G A G C T G A C T C G A T A C G T C T G A C G T A A C G T C A T G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TGTGAGGTTTTRWTGA---
---NNANTTTTATTGGNNN
 A C G T A C T G C A G T A C T G C G T A A T C G A C T G A G C T G A C T C G A T A C G T C T G A C G T A A C G T C A T G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G