Information for 19-AGAAAGCAGGATGGTA (Motif 39)

C T G A C T A G C G T A G C T A C T G A A C T G T G A C C T G A C A T G A T C G C G T A A C G T A C T G C A T G A C G T C G T A
Reverse Opposite:
G A C T C G T A G A T C T A G C C G T A C G A T A T G C G A T C A G C T A C T G G T A C A G C T C A G T A C G T G A T C A G C T
p-value:1e-8
log p-value:-1.966e+01
Information Content per bp:1.736
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif8.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.2 +/- 32.7bp
Average Position of motif in Background42.2 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:1
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGAAAGCAGGATGGTA--
GGAAGGAAGGAAGGAAGG
 C T G A C T A G C G T A G C T A C T G A A C T G T G A C C T G A C A T G A T C G C G T A A C G T A C T G C A T G A C G T C G T A A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--AGAAAGCAGGATGGTA
GGAGAAAGGTGCGA----
 A C G T A C G T C T G A C T A G C G T A G C T A C T G A A C T G T G A C C T G A C A T G A T C G C G T A A C G T A C T G C A T G A C G T C G T A
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:AGAAAGCAGGATGGTA
ACAAAGGNBCCT----
 C T G A C T A G C G T A G C T A C T G A A C T G T G A C C T G A C A T G A T C G C G T A A C G T A C T G C A T G A C G T C G T A
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:AGAAAGCAGGATGGTA
ACAAAG----------
 C T G A C T A G C G T A G C T A C T G A A C T G T G A C C T G A C A T G A T C G C G T A A C G T A C T G C A T G A C G T C G T A
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BCL6B/MA0731.1/Jaspar

Match Rank:5
Score:0.49
Offset:-9
Orientation:reverse strand
Alignment:---------AGAAAGCAGGATGGTA
TGAATTCCTAGAAAGCA--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G C G T A G C T A C T G A A C T G T G A C C T G A C A T G A T C G C G T A A C G T A C T G C A T G A C G T C G T A
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.48
Offset:-6
Orientation:forward strand
Alignment:------AGAAAGCAGGATGGTA
AAACAGACAAAGGAAT------
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G C G T A G C T A C T G A A C T G T G A C C T G A C A T G A T C G C G T A A C G T A C T G C A T G A C G T C G T A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:7
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-AGAAAGCAGGATGGTA
ADGGYAGYAGCATCT--
 A C G T C T G A C T A G C G T A G C T A C T G A A C T G T G A C C T G A C A T G A T C G C G T A A C G T A C T G C A T G A C G T C G T A
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.46
Offset:4
Orientation:reverse strand
Alignment:AGAAAGCAGGATGGTA
----ANCAGGATGT--
 C T G A C T A G C G T A G C T A C T G A A C T G T G A C C T G A C A T G A T C G C G T A A C G T A C T G C A T G A C G T C G T A
A C G T A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:9
Score:0.46
Offset:-5
Orientation:forward strand
Alignment:-----AGAAAGCAGGATGGTA
GACAGAGATATCAGTGT----
 A C G T A C G T A C G T A C G T A C G T C T G A C T A G C G T A G C T A C T G A A C T G T G A C C T G A C A T G A T C G C G T A A C G T A C T G C A T G A C G T C G T A
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.45
Offset:4
Orientation:reverse strand
Alignment:AGAAAGCAGGATGGTA
----GGGAGGACNG--
 C T G A C T A G C G T A G C T A C T G A A C T G T G A C C T G A C A T G A T C G C G T A A C G T A C T G C A T G A C G T C G T A
A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T