Information for 12-TTGTTTGTGKARC (Motif 31)

A C G T C G A T C T A G A C G T C A G T C G A T A C T G A C G T C A T G C A G T G T C A C T G A A G T C
Reverse Opposite:
C T A G A G C T A C G T G T C A G T A C T C G A T G A C G C T A G T C A C G T A A G T C C G T A C G T A
p-value:1e-9
log p-value:-2.248e+01
Information Content per bp:1.701
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.90%
Number of Background Sequences with motif76.3
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets50.6 +/- 26.0bp
Average Position of motif in Background47.4 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRY/MA0084.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TTGTTTGTGKARC
ATTGTTTAN-----
 A C G T A C G T C G A T C T A G A C G T C A G T C G A T A C T G A C G T C A T G C A G T G T C A C T G A A G T C
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TTGTTTGTGKARC
ATTGTT--------
 A C G T A C G T C G A T C T A G A C G T C A G T C G A T A C T G A C G T C A T G C A G T G T C A C T G A A G T C
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:3
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---TTGTTTGTGKARC
CCATTGTTNY------
 A C G T A C G T A C G T A C G T C G A T C T A G A C G T C A G T C G A T A C T G A C G T C A T G C A G T G T C A C T G A A G T C
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TTGTTTGTGKARC
ATTGTTA-------
 A C G T A C G T C G A T C T A G A C G T C A G T C G A T A C T G A C G T C A T G C A G T G T C A C T G A A G T C
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TTGTTTGTGKARC
GAATGTTTGTTT---
 A C G T A C G T A C G T C G A T C T A G A C G T C A G T C G A T A C T G A C G T C A T G C A G T G T C A C T G A A G T C
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:6
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TTGTTTGTGKARC
NTNTTGTTGTTTGTN-
 A C G T A C G T A C G T A C G T C G A T C T A G A C G T C A G T C G A T A C T G A C G T C A T G C A G T G T C A C T G A A G T C
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:7
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TTGTTTGTGKARC
TATTGTTTATT----
 A C G T A C G T A C G T C G A T C T A G A C G T C A G T C G A T A C T G A C G T C A T G C A G T G T C A C T G A A G T C
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:8
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TTGTTTGTGKARC
GNATTTTTTTTTTGANC
 A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C G T C A G T C G A T A C T G A C G T C A T G C A G T G T C A C T G A A G T C
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

PB0119.1_Foxa2_2/Jaspar

Match Rank:9
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TTGTTTGTGKARC
NCNTTTGTTATTTNN--
 A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C G T C A G T C G A T A C T G A C G T C A T G C A G T G T C A C T G A A G T C
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T A C G T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:10
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTGTTTGTGKARC
TTGTTTAC-----
 A C G T C G A T C T A G A C G T C A G T C G A T A C T G A C G T C A T G C A G T G T C A C T G A A G T C
C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T