Information for 1-CACATCACAAWGTAGR (Motif 3)

A G T C C G T A G T A C C G T A A G C T G T A C G T C A G T A C C G T A T G C A C G A T T A C G G C A T C G T A T C A G C T G A
Reverse Opposite:
A G C T A G T C A C G T C G T A A G T C C G T A A C G T A C G T A C T G A C G T A C T G C T G A A C G T A C T G A C G T C T A G
p-value:1e-13
log p-value:-3.205e+01
Information Content per bp:1.753
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.8 +/- 25.3bp
Average Position of motif in Background73.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0134.1_Pbx1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CACATCACAAWGTAGR
TCACCCATCAATAAACA--
 A C G T A C G T A C G T A G T C C G T A G T A C C G T A A G C T G T A C G T C A G T A C C G T A T G C A C G A T T A C G G C A T C G T A T C A G C T G A
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A A C G T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CACATCACAAWGTAGR
NNNTCCATCCCATAANN--
 A C G T A C G T A C G T A G T C C G T A G T A C C G T A A G C T G T A C G T C A G T A C C G T A T G C A C G A T T A C G G C A T C G T A T C A G C T G A
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A A C G T A C G T

ZNF410/MA0752.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CACATCACAAWGTAGR-
TCCATCCCATAATACTC
 A G T C C G T A G T A C C G T A A G C T G T A C G T C A G T A C C G T A T G C A C G A T T A C G G C A T C G T A T C A G C T G A A C G T
A C G T T G A C G A T C G C T A C A G T G T A C G T A C A T G C G T C A A G C T G T C A T C G A G A C T C T G A G T A C A G C T G T A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CACATCACAAWGTAGR
NWAACCACADNN----
 A G T C C G T A G T A C C G T A A G C T G T A C G T C A G T A C C G T A T G C A C G A T T A C G G C A T C G T A T C A G C T G A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CACATCACAAWGTAGR
-ACATCAAAGGNA---
 A G T C C G T A G T A C C G T A A G C T G T A C G T C A G T A C C G T A T G C A C G A T T A C G G C A T C G T A T C A G C T G A
A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CACATCACAAWGTAGR
NAAACCACAG------
 A G T C C G T A G T A C C G T A A G C T G T A C G T C A G T A C C G T A T G C A C G A T T A C G G C A T C G T A T C A G C T G A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CACATCACAAWGTAGR
ATTTGCATAACAAAG----
 A C G T A C G T A C G T A G T C C G T A G T A C C G T A A G C T G T A C G T C A G T A C C G T A T G C A C G A T T A C G G C A T C G T A T C A G C T G A
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CACATCACAAWGTAGR
-AAACCGCAAA-----
 A G T C C G T A G T A C C G T A A G C T G T A C G T C A G T A C C G T A T G C A C G A T T A C G G C A T C G T A T C A G C T G A
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CACATCACAAWGTAGR
TATAGATCAAAGGAAAA-
 A C G T A C G T A G T C C G T A G T A C C G T A A G C T G T A C G T C A G T A C C G T A T G C A C G A T T A C G G C A T C G T A T C A G C T G A
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CACATCACAAWGTAGR
NNNAGATCAAAGGANNN-
 A C G T A C G T A G T C C G T A G T A C C G T A A G C T G T A C G T C A G T A C C G T A T G C A C G A T T A C G G C A T C G T A T C A G C T G A
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T A C G T