Information for 12-GTGCAGGCGAAGATTA (Motif 20)

A T C G A G C T A C T G A G T C C G T A A C T G A T C G A T G C A C T G C G T A C T G A A C T G C G T A A C G T C A G T C G T A
Reverse Opposite:
A C G T G T C A C G T A A C G T A G T C A G C T A C G T G T A C A T C G A T G C A G T C A C G T A C T G A G T C T C G A A T G C
p-value:1e-11
log p-value:-2.601e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.2 +/- 27.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTGCAGGCGAAGATTA
GCGCATGCGCAG----
 A T C G A G C T A C T G A G T C C G T A A C T G A T C G A T G C A C T G C G T A C T G A A C T G C G T A A C G T C A G T C G T A
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTGCAGGCGAAGATTA
TGCGCAGGCGC------
 A C G T A T C G A G C T A C T G A G T C C G T A A C T G A T C G A T G C A C T G C G T A C T G A A C T G C G T A A C G T C A G T C G T A
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:3
Score:0.55
Offset:9
Orientation:forward strand
Alignment:GTGCAGGCGAAGATTA-
---------RGGATTAR
 A T C G A G C T A C T G A G T C C G T A A C T G A T C G A T G C A C T G C G T A C T G A A C T G C G T A A C G T C A G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

OTX2/MA0712.1/Jaspar

Match Rank:4
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:GTGCAGGCGAAGATTA-
---------NGGATTAA
 A T C G A G C T A C T G A G T C C G T A A C T G A T C G A T G C A C T G C G T A C T G A A C T G C G T A A C G T C A G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:5
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:GTGCAGGCGAAGATTA--
--------VRGGATTARN
 A T C G A G C T A C T G A G T C C G T A A C T G A T C G A T G C A C T G C G T A C T G A A C T G C G T A A C G T C A G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

GSC2/MA0891.1/Jaspar

Match Rank:6
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:GTGCAGGCGAAGATTA--
--------GNGGATTAGN
 A T C G A G C T A C T G A G T C C G T A A C T G A T C G A T G C A C T G C G T A C T G A A C T G C G T A A C G T C A G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

NRF(NRF)/Promoter/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTGCAGGCGAAGATTA
GCGCATGCGCAC----
 A T C G A G C T A C T G A G T C C G T A A C T G A T C G A T G C A C T G C G T A C T G A A C T G C G T A A C G T C A G T C G T A
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C A C G T A C G T A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GTGCAGGCGAAGATTA--
----TTGCCCGGATTAGG
 A T C G A G C T A C T G A G T C C G T A A C T G A T C G A T G C A C T G C G T A C T G A A C T G C G T A A C G T C A G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

Crx/MA0467.1/Jaspar

Match Rank:9
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GTGCAGGCGAAGATTA-
------AAGAGGATTAG
 A T C G A G C T A C T G A G T C C G T A A C T G A T C G A T G C A C T G C G T A C T G A A C T G C G T A A C G T C A G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:10
Score:0.53
Offset:10
Orientation:reverse strand
Alignment:GTGCAGGCGAAGATTA--
----------GGATTAGC
 A T C G A G C T A C T G A G T C C G T A A C T G A T C G A T G C A C T G C G T A C T G A A C T G C G T A A C G T C A G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C