Information for 11-GGAGAGCCTCCYKGNA (Motif 16)

A C T G A C T G C G T A A C T G T G C A A C T G A G T C A G T C C G A T A G T C A G T C A G T C A C G T A C T G A G C T G T C A
Reverse Opposite:
A C G T C T G A A G T C G T C A C T A G A C T G T A C G C G T A A C T G C T A G A G T C A C G T A G T C A C G T A G T C G T A C
p-value:1e-11
log p-value:-2.703e+01
Information Content per bp:1.770
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.4 +/- 19.0bp
Average Position of motif in Background61.2 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGAGAGCCTCCYKGNA
CTTGAGTGGCT-------
 A C G T A C G T A C T G A C T G C G T A A C T G T G C A A C T G A G T C A G T C C G A T A G T C A G T C A G T C A C G T A C T G A G C T G T C A
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGAGAGCCTCCYKGNA
TTGAGTGSTT-------
 A C G T A C T G A C T G C G T A A C T G T G C A A C T G A G T C A G T C C G A T A G T C A G T C A G T C A C G T A C T G A G C T G T C A
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:3
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GGAGAGCCTCCYKGNA---
----RGSMTBCTGGGAAAT
 A C T G A C T G C G T A A C T G T G C A A C T G A G T C A G T C C G A T A G T C A G T C A G T C A C G T A C T G A G C T G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GGAGAGCCTCCYKGNA
NNNGGGGCGCCCCCNN---
 A C G T A C G T A C G T A C T G A C T G C G T A A C T G T G C A A C T G A G T C A G T C C G A T A G T C A G T C A G T C A C G T A C T G A G C T G T C A
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GGAGAGCCTCCYKGNA
GGNGCGNCTGTTNNN-
 A C T G A C T G C G T A A C T G T G C A A C T G A G T C A G T C C G A T A G T C A G T C A G T C A C G T A C T G A G C T G T C A
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GGAGAGCCTCCYKGNA
BTBRAGTGSN--------
 A C G T A C G T A C T G A C T G C G T A A C T G T G C A A C T G A G T C A G T C C G A T A G T C A G T C A G T C A C G T A C T G A G C T G T C A
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GGAGAGCCTCCYKGNA
CTYRAGTGSY--------
 A C G T A C G T A C T G A C T G C G T A A C T G T G C A A C T G A G T C A G T C C G A T A G T C A G T C A G T C A C G T A C T G A G C T G T C A
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GGAGAGCCTCCYKGNA
CGGAGC-----------
 A C G T A C T G A C T G C G T A A C T G T G C A A C T G A G T C A G T C C G A T A G T C A G T C A G T C A C G T A C T G A G C T G T C A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GGAGAGCCTCCYKGNA-
TACGAGACTCCTCTAAC
 A C T G A C T G C G T A A C T G T G C A A C T G A G T C A G T C C G A T A G T C A G T C A G T C A C G T A C T G A G C T G T C A A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:10
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:GGAGAGCCTCCYKGNA
-TAGAANVTTCTAGAA
 A C T G A C T G C G T A A C T G T G C A A C T G A G T C A G T C C G A T A G T C A G T C A G T C A C G T A C T G A G C T G T C A
A C G T G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A