Information for 7-TTHTGAAAVATTGCCA (Motif 12)

A C G T A G C T G T A C C G A T A C T G C T G A C T G A C G T A T G A C G T C A A C G T A C G T A C T G G A T C A G T C C G T A
Reverse Opposite:
A C G T A C T G C T A G A G T C G T C A C G T A A C G T A C T G A C G T A G C T A G C T A G T C C G T A C A G T C T G A C G T A
p-value:1e-12
log p-value:-2.791e+01
Information Content per bp:1.786
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.3 +/- 21.5bp
Average Position of motif in Background25.0 +/- 0.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTHTGAAAVATTGCCA-
-CTTGGCANNNTGCCAA
 A C G T A G C T G T A C C G A T A C T G C T G A C T G A C G T A T G A C G T C A A C G T A C G T A C T G G A T C A G T C C G T A A C G T
A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TTHTGAAAVATTGCCA-
---TGGCACCATGCCAA
 A C G T A G C T G T A C C G A T A C T G C T G A C T G A C G T A T G A C G T C A A C G T A C G T A C T G G A T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TTHTGAAAVATTGCCA-
---TGGCAGNCTGCCAG
 A C G T A G C T G T A C C G A T A C T G C T G A C T G A C G T A T G A C G T C A A C G T A C G T A C T G G A T C A G T C C G T A A C G T
A C G T A C G T A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.56
Offset:10
Orientation:forward strand
Alignment:TTHTGAAAVATTGCCA--
----------TTGCCAAG
 A C G T A G C T G T A C C G A T A C T G C T G A C T G A C G T A T G A C G T C A A C G T A C G T A C T G G A T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.54
Offset:9
Orientation:forward strand
Alignment:TTHTGAAAVATTGCCA--
---------CGTGCCAAG
 A C G T A G C T G T A C C G A T A C T G C T G A C T G A C G T A T G A C G T C A A C G T A C G T A C T G G A T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TTHTGAAAVATTGCCA----
---GGGRAARRGRMCAGMTG
 A C G T A G C T G T A C C G A T A C T G C T G A C T G A C G T A T G A C G T C A A C G T A C G T A C T G G A T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:TTHTGAAAVATTGCCA--
--------NNTTGGCANN
 A C G T A G C T G T A C C G A T A C T G C T G A C T G A C G T A T G A C G T C A A C G T A C G T A C T G G A T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.53
Offset:10
Orientation:forward strand
Alignment:TTHTGAAAVATTGCCA--
----------YTGWCADY
 A C G T A G C T G T A C C G A T A C T G C T G A C T G A C G T A T G A C G T C A A C G T A C G T A C T G G A T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.53
Offset:11
Orientation:reverse strand
Alignment:TTHTGAAAVATTGCCA-
-----------TGCCAA
 A C G T A G C T G T A C C G A T A C T G C T G A C T G A C G T A T G A C G T C A A C G T A C G T A C T G G A T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.53
Offset:11
Orientation:forward strand
Alignment:TTHTGAAAVATTGCCA---
-----------TGTCANYT
 A C G T A G C T G T A C C G A T A C T G C T G A C T G A C G T A T G A C G T C A A C G T A C G T A C T G G A T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T