Information for 2-TACAACATTMAATCTG (Motif 5)

C G A T C T G A T G A C C T G A C G T A A T G C G T C A C A G T A C G T G T C A C G T A G T C A A C G T A G T C C G A T A C T G
Reverse Opposite:
A G T C C G T A A C T G G T C A C A G T C G A T C A G T C G T A G T C A C A G T A T C G C G A T A G C T A C T G G A C T C G T A
p-value:1e-14
log p-value:-3.292e+01
Information Content per bp:1.722
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 21.9bp
Average Position of motif in Background78.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:1
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TACAACATTMAATCTG
---GGCCATAAATCA-
 C G A T C T G A T G A C C T G A C G T A A T G C G T C A C A G T A C G T G T C A C G T A G T C A A C G T A G T C C G A T A C T G
A C G T A C G T A C G T C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:2
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TACAACATTMAATCTG
---GGCCATAAATCAC
 C G A T C T G A T G A C C T G A C G T A A T G C G T C A C A G T A C G T G T C A C G T A G T C A A C G T A G T C C G A T A C T G
A C G T A C G T A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TACAACATTMAATCTG
GGTTAAACATTAA-----
 A C G T A C G T C G A T C T G A T G A C C T G A C G T A A T G C G T C A C A G T A C G T G T C A C G T A G T C A A C G T A G T C C G A T A C T G
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T A C G T A C G T A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:4
Score:0.52
Offset:4
Orientation:forward strand
Alignment:TACAACATTMAATCTG
----GCCATAAATCA-
 C G A T C T G A T G A C C T G A C G T A A T G C G T C A C A G T A C G T G T C A C G T A G T C A A C G T A G T C C G A T A C T G
A C G T A C G T A C G T A C G T T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T

PBX1/MA0070.1/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TACAACATTMAATCTG
-CCATCAATCAAA---
 C G A T C T G A T G A C C T G A C G T A A T G C G T C A C A G T A C G T G T C A C G T A G T C A A C G T A G T C C G A T A C T G
A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TACAACATTMAATCTG
TTGCAACATN-------
 A C G T C G A T C T G A T G A C C T G A C G T A A T G C G T C A C A G T A C G T G T C A C G T A G T C A A C G T A G T C C G A T A C T G
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:TACAACATTMAATCTG
---GGCCATAAATCA-
 C G A T C T G A T G A C C T G A C G T A A T G C G T C A C A G T A C G T G T C A C G T A G T C A A C G T A G T C C G A T A C T G
A C G T A C G T A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TACAACATTMAATCTG
GAAGATCAATCACTTA-
 A C G T C G A T C T G A T G A C C T G A C G T A A T G C G T C A C A G T A C G T G T C A C G T A G T C A A C G T A G T C C G A T A C T G
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TACAACATTMAATCTG
TNNAGAACAATANATNN-
 A C G T A C G T C G A T C T G A T G A C C T G A C G T A A T G C G T C A C A G T A C G T G T C A C G T A G T C A A C G T A G T C C G A T A C T G
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--TACAACATTMAATCTG
TTAAGAACAATAAATT--
 A C G T A C G T C G A T C T G A T G A C C T G A C G T A A T G C G T C A C A G T A C G T G T C A C G T A G T C A A C G T A G T C C G A T A C T G
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T A C G T A C G T