Information for 2-GAGGGAGGGGGCG (Motif 3)

T C A G T G C A A C T G C T A G T A C G G T C A C T A G C T A G C T A G T A C G T A C G G T A C C A T G
Reverse Opposite:
G T A C C A T G A G T C A T G C A G T C A G T C A G T C C A G T A T G C G A T C T A G C A C G T A G T C
p-value:1e-19
log p-value:-4.452e+01
Information Content per bp:1.732
Number of Target Sequences with motif69.0
Percentage of Target Sequences with motif8.05%
Number of Background Sequences with motif1051.8
Percentage of Background Sequences with motif2.16%
Average Position of motif in Targets47.5 +/- 25.0bp
Average Position of motif in Background48.4 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP1/MA0079.3/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GAGGGAGGGGGCG
GGGGGCGGGGC--
 T C A G T G C A A C T G C T A G T A C G G T C A C T A G C T A G C T A G T A C G T A C G G T A C C A T G
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.76
Offset:2
Orientation:forward strand
Alignment:GAGGGAGGGGGCG
--GGGGGGGG---
 T C A G T G C A A C T G C T A G T A C G G T C A C T A G C T A G C T A G T A C G T A C G G T A C C A T G
A C G T A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:3
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:GAGGGAGGGGGCG
-GGGGNGGGGC--
 T C A G T G C A A C T G C T A G T A C G G T C A C T A G C T A G C T A G T A C G T A C G G T A C C A T G
A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:4
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GAGGGAGGGGGCG
GTGGGGGAGGGG---
 A C G T A C G T T C A G T G C A A C T G C T A G T A C G G T C A C T A G C T A G C T A G T A C G T A C G G T A C C A T G
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GAGGGAGGGGGCG-----
-NNNAAGGGGGCGGGNNN
 T C A G T G C A A C T G C T A G T A C G G T C A C T A G C T A G C T A G T A C G T A C G G T A C C A T G A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.73
Offset:-8
Orientation:forward strand
Alignment:--------GAGGGAGGGGGCG
SMCAGTCWGAKGGAGGAGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G C A A C T G C T A G T A C G G T C A C T A G C T A G C T A G T A C G T A C G G T A C C A T G
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T

EGR1/MA0162.2/Jaspar

Match Rank:7
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:GAGGGAGGGGGCG----
---GGCGGGGGCGGGGG
 T C A G T G C A A C T G C T A G T A C G G T C A C T A G C T A G C T A G T A C G T A C G G T A C C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

PB0010.1_Egr1_1/Jaspar

Match Rank:8
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GAGGGAGGGGGCG--
-ANTGCGGGGGCGGN
 T C A G T G C A A C T G C T A G T A C G G T C A C T A G C T A G C T A G T A C G T A C G G T A C C A T G A C G T A C G T
A C G T G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GAGGGAGGGGGCG
AGGGGGCGGGGCTG
 A C G T T C A G T G C A A C T G C T A G T A C G G T C A C T A G C T A G C T A G T A C G T A C G G T A C C A T G
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

PB0097.1_Zfp281_1/Jaspar

Match Rank:10
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GAGGGAGGGGGCG--
GGGGGGGGGGGGGGA
 T C A G T G C A A C T G C T A G T A C G G T C A C T A G C T A G C T A G T A C G T A C G G T A C C A T G A C G T A C G T
A C T G C T A G C A T G C A T G A C T G C A T G C A T G C T A G C T A G C A T G A T C G C A T G C A T G T C A G G C T A