Information for 9-TGAAGTACTT (Motif 19)

C G A T A T C G C G T A C G T A A C T G C A G T G T C A A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A C T A G C A G T G T C A A G T C A C G T G C A T A T G C G C T A
p-value:1e-7
log p-value:-1.774e+01
Information Content per bp:1.848
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif61.8
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets49.6 +/- 21.3bp
Average Position of motif in Background50.8 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0112.1_Nkx2-3/Jaspar

Match Rank:1
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--TGAAGTACTT----
CTTTAAGTACTTAATG
 A C G T A C G T C G A T A T C G C G T A C G T A A C T G C A G T G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

PH0116.1_Nkx2-9/Jaspar

Match Rank:2
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---TGAAGTACTT----
NATTTAAGTACTTNAAA
 A C G T A C G T A C G T C G A T A T C G C G T A C G T A A C T G C A G T G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

PH0117.1_Nkx3-1/Jaspar

Match Rank:3
Score:0.83
Offset:-3
Orientation:reverse strand
Alignment:---TGAAGTACTT----
NATTTAAGTACTTANNA
 A C G T A C G T A C G T C G A T A T C G C G T A C G T A A C T G C A G T G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:4
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---TGAAGTACTT----
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T C G A T A T C G C G T A C G T A A C T G C A G T G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TGAAGTACTT
TTAAGTGCTT
 C G A T A T C G C G T A C G T A A C T G C A G T G T C A A G T C A C G T A C G T
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGAAGTACTT
NTCAAGTGG--
 A C G T C G A T A T C G C G T A C G T A A C T G C A G T G T C A A G T C A C G T A C G T
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T

PH0020.1_Dlx1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGAAGTACTT---
CTGAGGTAATTAAT
 A C G T C G A T A T C G C G T A C G T A A C T G C A G T G T C A A G T C A C G T A C G T A C G T A C G T A C G T
A G T C A G C T C T A G T G C A C T A G C T A G G A C T T C G A C G T A C G A T A C G T C T G A C G T A A G C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGAAGTACTT
CTYRAGTGSY-
 A C G T C G A T A T C G C G T A C G T A A C T G C A G T G T C A A G T C A C G T A C G T
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGAAGTACTT
NGAAGC----
 C G A T A T C G C G T A C G T A A C T G C A G T G T C A A G T C A C G T A C G T
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

PH0021.1_Dlx2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGAAGTACTT-----
CTGANNTAATTATNNN
 A C G T C G A T A T C G C G T A C G T A A C T G C A G T G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G A C T C A T G C T G A C T A G T A C G G A C T C G T A C G T A C G A T A C G T C T G A G A C T G A C T A G T C A G T C