Information for 1-BKCCACNAGGTGGCGG (Motif 1)

A C G T C A G T G T A C A G T C C T G A A T G C G T A C C G T A A C T G C T A G A C G T A C T G A C T G A T G C C T A G A T C G
Reverse Opposite:
A T G C A G T C A T C G A G T C A G T C G T C A A G T C G T A C C G A T C A T G A T C G A G C T A C T G A C T G G T C A T G C A
p-value:1e-22
log p-value:-5.172e+01
Information Content per bp:1.724
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif20.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets47.2 +/- 25.4bp
Average Position of motif in Background45.0 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-BKCCACNAGGTGGCGG---
TGGCCACCAGGTGGCACTNT
 A C G T A C G T C A G T G T A C A G T C C T G A A T G C G T A C C G T A A C T G C T A G A C G T A C T G A C T G A T G C C T A G A T C G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-BKCCACNAGGTGGCGG--
TGGCCACCAGGGGGCGCTA
 A C G T A C G T C A G T G T A C A G T C C T G A A T G C G T A C C G T A A C T G C T A G A C G T A C T G A C T G A T G C C T A G A T C G A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:BKCCACNAGGTGGCGG-----
-GCCASCAGGGGGCGCYVNNG
 A C G T C A G T G T A C A G T C C T G A A T G C G T A C C G T A A C T G C T A G A C G T A C T G A C T G A T G C C T A G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:BKCCACNAGGTGGCGG----
---NNNAAGGGGGCGGGNNN
 A C G T C A G T G T A C A G T C C T G A A T G C G T A C C G T A A C T G C T A G A C G T A C T G A C T G A T G C C T A G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

YY1(Zf)/Promoter/Homer

Match Rank:5
Score:0.63
Offset:5
Orientation:forward strand
Alignment:BKCCACNAGGTGGCGG-
-----CAAGATGGCGGC
 A C G T C A G T G T A C A G T C C T G A A T G C G T A C C G T A A C T G C T A G A C G T A C T G A C T G A T G C C T A G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:BKCCACNAGGTGGCGG
----AACAGATGGC--
 A C G T C A G T G T A C A G T C C T G A A T G C G T A C C G T A A C T G C T A G A C G T A C T G A C T G A T G C C T A G A T C G
A C G T A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:forward strand
Alignment:BKCCACNAGGTGGCGG-
-----CAAGATGGCGGC
 A C G T C A G T G T A C A G T C C T G A A T G C G T A C C G T A A C T G C T A G A C G T A C T G A C T G A T G C C T A G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

PB0101.1_Zic1_1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:BKCCACNAGGTGGCGG
CACCCCCGGGGGGG--
 A C G T C A G T G T A C A G T C C T G A A T G C G T A C C G T A A C T G C T A G A C G T A C T G A C T G A T G C C T A G A T C G
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:BKCCACNAGGTGGCGG
---CACGTGNT-----
 A C G T C A G T G T A C A G T C C T G A A T G C G T A C C G T A A C T G C T A G A C G T A C T G A C T G A T G C C T A G A T C G
A C G T A C G T A C G T G A T C C G T A A T G C T A C G G A C T C T A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:BKCCACNAGGTGGCGG------
-----NAGANTGGCGGGGNGNA
 A C G T C A G T G T A C A G T C C T G A A T G C G T A C C G T A A C T G C T A G A C G T A C T G A C T G A T G C C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A