Information for 5-TTGGCCGCGA (Motif 8)

A C G T A G C T A C T G A C T G A T G C A G T C A T C G A G T C T C A G C T G A
Reverse Opposite:
A G C T A G T C C T A G A T G C T A C G A T C G A G T C A G T C C T G A C G T A
p-value:1e-9
log p-value:-2.296e+01
Information Content per bp:1.848
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif73.7
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets45.9 +/- 28.9bp
Average Position of motif in Background51.0 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TTGGCCGCGA
TTGGCA----
 A C G T A G C T A C T G A C T G A T G C A G T C A T C G A G T C T C A G C T G A
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TTGGCCGCGA---
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G A C T G A T G C A G T C A T C G A G T C T C A G C T G A A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCCGCGA
NTTGGCANN--
 A C G T A C G T A G C T A C T G A C T G A T G C A G T C A T C G A G T C T C A G C T G A
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTGGCCGCGA
CCGATTGGCT----
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G A C T G A T G C A G T C A T C G A G T C T C A G C T G A
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T A C G T

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCCGCGA-
TTTTCGCGCGAA
 A C G T A C G T A G C T A C T G A C T G A T G C A G T C A T C G A G T C T C A G C T G A A C G T
G A C T A G C T A G C T A G C T A T G C A T C G A G T C A C T G A T G C A T C G T C G A T C G A

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTGGCCGCGA---
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G A C T G A T G C A G T C A T C G A G T C T C A G C T G A A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTGGCCGCGA
TGATTGGCTANN-
 A C G T A C G T A C G T A C G T A G C T A C T G A C T G A T G C A G T C A T C G A G T C T C A G C T G A
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCCGCGA
NNTTGGCANN--
 A C G T A C G T A C G T A G C T A C T G A C T G A T G C A G T C A T C G A G T C T C A G C T G A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T

E2F8/MA0865.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCCGCGA-
TTTGGCGGGAAA
 A C G T A C G T A G C T A C T G A C T G A T G C A G T C A T C G A G T C T C A G C T G A A C G T
C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A

E2F7/MA0758.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCCGCGA--
TTTTGGCGGGAAAA
 A C G T A C G T A C G T A G C T A C T G A C T G A T G C A G T C A T C G A G T C T C A G C T G A A C G T A C G T
C G A T C G A T G C A T C G A T T A C G A C T G A G T C A C T G A T C G A T C G C T G A C T G A G C T A G C T A