Information for 4-GCWCWSCCTCCYGTGM (Motif 7)

A C T G A G T C C G A T A G T C G C A T A T G C A G T C A G T C A C G T A G T C A G T C A G C T A C T G A C G T C T A G T G A C
Reverse Opposite:
A C G T A G T C C G T A A G T C C T G A A C T G A C T G C G T A A C T G A C T G A T C G C G T A A C T G C G T A A C T G A G T C
p-value:1e-11
log p-value:-2.564e+01
Information Content per bp:1.866
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.4 +/- 25.7bp
Average Position of motif in Background36.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GCWCWSCCTCCYGTGM
---CCCCCTGCTGTG-
 A C T G A G T C C G A T A G T C G C A T A T G C A G T C A G T C A C G T A G T C A G T C A G C T A C T G A C G T C T A G T G A C
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCWCWSCCTCCYGTGM
GCTCGGSCTC------
 A C T G A G T C C G A T A G T C G C A T A T G C A G T C A G T C A C G T A G T C A G T C A G C T A C T G A C G T C T A G T G A C
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCWCWSCCTCCYGTGM--
---NNTCCTGCTGTGNNN
 A C T G A G T C C G A T A G T C G C A T A T G C A G T C A G T C A C G T A G T C A G T C A G C T A C T G A C G T C T A G T G A C A C G T A C G T
A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCWCWSCCTCCYGTGM--
---TNTCCTGCTGTGNNG
 A C T G A G T C C G A T A G T C G C A T A T G C A G T C A G T C A C G T A G T C A G T C A G C T A C T G A C G T C T A G T G A C A C G T A C G T
A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCWCWSCCTCCYGTGM
-GGCCYCCTGCTGDGH
 A C T G A G T C C G A T A G T C G C A T A T G C A G T C A G T C A C G T A G T C A G T C A G C T A C T G A C G T C T A G T G A C
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GCWCWSCCTCCYGTGM
-----ACTTCCTGTT-
 A C T G A G T C C G A T A G T C G C A T A T G C A G T C A G T C A C G T A G T C A G T C A G C T A C T G A C G T C T A G T G A C
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GCWCWSCCTCCYGTGM--
---TCNCCTGCTGNGNNN
 A C T G A G T C C G A T A G T C G C A T A T G C A G T C A G T C A C G T A G T C A G T C A G C T A C T G A C G T C T A G T G A C A C G T A C G T
A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCWCWSCCTCCYGTGM
-GACCCCCCGCTGTG-
 A C T G A G T C C G A T A G T C G C A T A T G C A G T C A G T C A C G T A G T C A G T C A G C T A C T G A C G T C T A G T G A C
A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCWCWSCCTCCYGTGM
GCTCCGCCCMCY----
 A C T G A G T C C G A T A G T C G C A T A T G C A G T C A G T C A C G T A G T C A G T C A G C T A C T G A C G T C T A G T G A C
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GCWCWSCCTCCYGTGM
------CCTGCTGAGH
 A C T G A G T C C G A T A G T C G C A T A T G C A G T C A G T C A C G T A G T C A G T C A G C T A C T G A C G T C T A G T G A C
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A