Information for 3-GTGTGTGDTGTGT (Motif 5)

A T C G A C G T A C T G A G C T A C T G C A G T C T A G C T A G A C G T A T C G A C G T A T C G A C G T
Reverse Opposite:
C G T A A T G C C G T A A T G C G T C A G A T C G A T C G C T A A G T C C T G A G T A C G T C A A T G C
p-value:1e-11
log p-value:-2.745e+01
Information Content per bp:1.788
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets66.9 +/- 19.3bp
Average Position of motif in Background54.4 +/- 35.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GTGTGTGDTGTGT
NNGCGTGTGTGCNGCN-
 A C G T A C G T A C G T A C G T A T C G A C G T A C T G A G C T A C T G C A G T C T A G C T A G A C G T A T C G A C G T A T C G A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTGTGTGDTGTGT
NNHTGTGGTTWN-
 A T C G A C G T A C T G A G C T A C T G C A G T C T A G C T A G A C G T A T C G A C G T A T C G A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTGTGTGDTGTGT
NTGGGTGTGGCC---
 A C G T A C G T A T C G A C G T A C T G A G C T A C T G C A G T C T A G C T A G A C G T A T C G A C G T A T C G A C G T
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTGTGTGDTGTGT
TGGGTGTGGCN---
 A C G T A T C G A C G T A C T G A G C T A C T G C A G T C T A G C T A G A C G T A T C G A C G T A T C G A C G T
C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GTGTGTGDTGTGT
GTCTGTGGTTT--
 A T C G A C G T A C T G A G C T A C T G C A G T C T A G C T A G A C G T A T C G A C G T A T C G A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GTGTGTGDTGTGT
NNNNTTGTGTGCTTNN-
 A C G T A C G T A C G T A C G T A T C G A C G T A C T G A G C T A C T G C A G T C T A G C T A G A C G T A T C G A C G T A T C G A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTGTGTGDTGTGT
CGTGGGTGGTCC--
 A C G T A T C G A C G T A C T G A G C T A C T G C A G T C T A G C T A G A C G T A T C G A C G T A T C G A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTGTGTGDTGTGT
TGGGTGTGGC----
 A C G T A T C G A C G T A C T G A G C T A C T G C A G T C T A G C T A G A C G T A T C G A C G T A T C G A C G T
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----GTGTGTGDTGTGT--
NGGGGGGGGGTGGTTTGGGG
 A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A G C T A C T G C A G T C T A G C T A G A C G T A T C G A C G T A T C G A C G T A C G T A C G T
A C G T A T C G C A T G A C T G C A T G A C T G A C T G A C T G A C T G A C T G A C G T A C T G C A T G A C G T A C G T A C G T A C T G A C T G A C T G A C T G

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GTGTGTGDTGTGT
GGGGGTGTGTCC---
 A C G T A C G T A T C G A C G T A C T G A G C T A C T G C A G T C T A G C T A G A C G T A T C G A C G T A T C G A C G T
T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C A C G T A C G T A C G T