Information for 17-CTTATCCAGG (Motif 40)

A G T C A C G T A C G T C G T A A C G T A G T C A G T C G T C A C T A G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A C T G C G T A A C G T C G T A C G T A A C T G
p-value:1e-4
log p-value:-9.524e+00
Information Content per bp:1.935
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.4 +/- 24.8bp
Average Position of motif in Background58.2 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CTTATCCAGG
YCTTATCTBN-
 A C G T A G T C A C G T A C G T C G T A A C G T A G T C A G T C G T C A C T A G A C T G
A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C A C G T

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CTTATCCAGG
YCTTATCWVN-
 A C G T A G T C A C G T A C G T C G T A A C G T A G T C A G T C G T C A C T A G A C T G
A G C T A T G C G A C T G C A T C G T A A C G T A G T C C G A T T A C G A T G C A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CTTATCCAGG
NNCTTATCTN--
 A C G T A C G T A G T C A C G T A C G T C G T A A C G T A G T C A G T C G T C A C T A G A C T G
A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CTTATCCAGG
NCCTTATCTG--
 A C G T A C G T A G T C A C G T A C G T C G T A A C G T A G T C A G T C G T C A C T A G A C T G
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T A C G T

PB0023.1_Gata6_1/Jaspar

Match Rank:5
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----CTTATCCAGG--
NNANTCTTATCTNNNNN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A A C G T A G T C A G T C G T C A C T A G A C T G A C G T A C G T
A G T C C G T A G C T A G A C T A C G T A T G C C G A T C G A T C T G A C G A T G T A C C G A T G T A C A C G T G C T A C A G T G C T A

GATA5/MA0766.1/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CTTATCCAGG
TCTTATCT---
 A C G T A G T C A C G T A C G T C G T A A C G T A G T C A G T C G T C A C T A G A C T G
A G C T A T G C G A C T C G A T C G T A A G C T A G T C C G A T A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CTTATCCAGG
TCTTATCT---
 A C G T A G T C A C G T A C G T C G T A A C G T A G T C A G T C G T C A C T A G A C T G
A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTTATCCAGG
GCTAATCC---
 A C G T A G T C A C G T A C G T C G T A A C G T A G T C A G T C G T C A C T A G A C T G
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CTTATCCAGG
ATAATCCC--
 A G T C A C G T A C G T C G T A A C G T A G T C A G T C G T C A C T A G A C T G
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTTATCCAGG---
NNTAATCCNGNCNN
 A C G T A G T C A C G T A C G T C G T A A C G T A G T C A G T C G T C A C T A G A C T G A C G T A C G T A C G T
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A