Information for 2-GGRWGGAGYTTCWGSS (Motif 3)

A C T G A C T G C T A G C G T A A C T G A C T G C T G A A C T G A G T C A C G T A C G T A G T C C G A T A C T G A T C G A T G C
Reverse Opposite:
A T C G A T G C A G T C G C T A A C T G T C G A C G T A C T A G A G T C A G C T A G T C A G T C C G A T A G T C A G T C A G T C
p-value:1e-13
log p-value:-3.161e+01
Information Content per bp:1.850
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.8 +/- 30.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGRWGGAGYTTCWGSS
AGGGGGCGGGGCTG-----
 A C G T A C G T A C G T A C T G A C T G C T A G C G T A A C T G A C T G C T G A A C T G A G T C A C G T A C G T A G T C C G A T A C T G A T C G A T G C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGRWGGAGYTTCWGSS
RGKGGGCGGAGC-------
 A C G T A C G T A C G T A C T G A C T G C T A G C G T A A C T G A C T G C T G A A C T G A G T C A C G T A C G T A G T C C G A T A C T G A T C G A T G C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:3
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GGRWGGAGYTTCWGSS
NNVDGGGYGGGGCYN-----
 A C G T A C G T A C G T A C G T A C T G A C T G C T A G C G T A A C T G A C T G C T G A A C T G A G T C A C G T A C G T A G T C C G A T A C T G A T C G A T G C
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGRWGGAGYTTCWGSS
ADGGYAGYAGCATCT---
 A C G T A C G T A C T G A C T G C T A G C G T A A C T G A C T G C T G A A C T G A G T C A C G T A C G T A G T C C G A T A C T G A T C G A T G C
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGRWGGAGYTTCWGSS
GGGGNGGGGC-------
 A C G T A C T G A C T G C T A G C G T A A C T G A C T G C T G A A C T G A G T C A C G T A C G T A G T C C G A T A C T G A T C G A T G C
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGRWGGAGYTTCWGSS
GGGAGGACNG------
 A C T G A C T G C T A G C G T A A C T G A C T G C T G A A C T G A G T C A C G T A C G T A G T C C G A T A C T G A T C G A T G C
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGRWGGAGYTTCWGSS
GGGGGCGGGGC-------
 A C G T A C G T A C T G A C T G C T A G C G T A A C T G A C T G C T G A A C T G A G T C A C G T A C G T A G T C C G A T A C T G A T C G A T G C
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGRWGGAGYTTCWGSS
GGGGGGGG--------
 A C T G A C T G C T A G C G T A A C T G A C T G C T G A A C T G A G T C A C G T A C G T A G T C C G A T A C T G A T C G A T G C
C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GGRWGGAGYTTCWGSS
NNNGGGHAGCAHRTGCTRCC
 A C G T A C G T A C G T A C G T A C T G A C T G C T A G C G T A A C T G A C T G C T G A A C T G A G T C A C G T A C G T A G T C C G A T A C T G A T C G A T G C
A T G C A G T C G C A T C T A G A C T G C T A G G A C T C G T A C T A G A G T C T G C A G C A T C T G A A C G T T C A G A G T C A C G T C T A G A G T C A G T C

Klf4/MA0039.2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGRWGGAGYTTCWGSS
TGGGTGGGGC-------
 A C G T A C T G A C T G C T A G C G T A A C T G A C T G C T G A A C T G A G T C A C G T A C G T A G T C C G A T A C T G A T C G A T G C
C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T