Information for 13-TGATTGGAGGGCAGCG (Motif 27)

A C G T A C T G C G T A A G C T A C G T A C T G A C T G C G T A A C T G A C T G A C T G A G T C C G T A A C T G A G T C A C T G
Reverse Opposite:
G T A C C T A G A G T C A C G T T A C G A G T C G T A C A G T C A C G T A G T C A G T C C G T A C T G A C G A T A G T C C G T A
p-value:1e-7
log p-value:-1.710e+01
Information Content per bp:1.914
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.5 +/- 21.7bp
Average Position of motif in Background31.7 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGATTGGAGGGCAGCG
TTGATTGN---------
 A C G T A C G T A C T G C G T A A G C T A C G T A C T G A C T G C G T A A C T G A C T G A C T G A G T C C G T A A C T G A G T C A C T G
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TGATTGGAGGGCAGCG
-----TNNGGGCAG--
 A C G T A C T G C G T A A G C T A C G T A C T G A C T G C G T A A C T G A C T G A C T G A G T C C G T A A C T G A G T C A C T G
A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGATTGGAGGGCAGCG
CTGATTGGTCNATTT--
 A C G T A C G T A C T G C G T A A G C T A C G T A C T G A C T G C G T A A C T G A C T G A C T G A G T C C G T A A C T G A G T C A C T G
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------TGATTGGAGGGCAGCG
AGAGTGCTGATTGGTCCA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G C T A C G T A C T G A C T G C G T A A C T G A C T G A C T G A G T C C G T A A C T G A G T C A C T G
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A A C G T A C G T A C G T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGATTGGAGGGCAGCG
GTATTGGGTGGGTAATT
 A C G T A C G T A C T G C G T A A G C T A C G T A C T G A C T G C G T A A C T G A C T G A C T G A G T C C G T A A C T G A G T C A C T G
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

PH0026.1_Duxbl/Jaspar

Match Rank:6
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------TGATTGGAGGGCAGCG
NNNNGTTGATTGGGTCG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G C T A C G T A C T G A C T G C G T A A C T G A C T G A C T G A G T C C G T A A C T G A G T C A C T G
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G A C G T A C G T A C G T A C G T A C G T

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:7
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------TGATTGGAGGGCAGCG
NNGAGGTTACTNNAGGTCA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G C T A C G T A C T G A C T G C G T A A C T G A C T G A C T G A G T C C G T A A C T G A G T C A C T G
T G A C G T C A T C A G T C G A C A T G C A T G A G C T G A C T G C T A G A T C G A C T G A C T A G C T T C G A C T A G C A T G C A G T A G T C T C G A A C G T A C G T A C G T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TGATTGGAGGGCAGCG
GGGTTACTANAGGTCA---
 A C G T A C G T A C G T A C G T A C T G C G T A A G C T A C G T A C T G A C T G C G T A A C T G A C T G A C T G A G T C C G T A A C T G A G T C A C T G
C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TGATTGGAGGGCAGCG
CNGTGATTTN---------
 A C G T A C G T A C G T A C G T A C T G C G T A A G C T A C G T A C T G A C T G C G T A A C T G A C T G A C T G A G T C C G T A A C T G A G T C A C T G
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGATTGGAGGGCAGCG
NAGANTGGCGGGGNGNA
 A C G T A C G T A C T G C G T A A G C T A C G T A C T G A C T G C G T A A C T G A C T G A C T G A G T C C G T A A C T G A G T C A C T G
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A