Information for 12-CGGGAATTCGAAA (Motif 19)

G T A C C T A G C T A G C T A G C G T A C G T A A C G T A C G T A G T C C T A G G T C A C T G A C G T A
Reverse Opposite:
A C G T A G C T A C G T A G T C A C T G C G T A G T C A A C G T A C G T A G T C A G T C A G T C A C T G
p-value:1e-8
log p-value:-1.986e+01
Information Content per bp:1.865
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.8 +/- 29.0bp
Average Position of motif in Background54.7 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0136.1_IRC900814_2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CGGGAATTCGAAA--
ATGGAAAGTCGTAAAA
 A C G T G T A C C T A G C T A G C T A G C G T A C G T A A C G T A C G T A G T C C T A G G T C A C T G A C G T A A C G T A C G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CGGGAATTCGAAA
----NATTCAAAT
 G T A C C T A G C T A G C T A G C G T A C G T A A C G T A C G T A G T C C T A G G T C A C T G A C G T A
A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGGGAATTCGAAA
CCWGGAATGY----
 A C G T G T A C C T A G C T A G C T A G C G T A C G T A A C G T A C G T A G T C C T A G G T C A C T G A C G T A
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGGGAATTCGAAA
NCTGGAATGC----
 A C G T G T A C C T A G C T A G C T A G C G T A C G T A A C G T A C G T A G T C C T A G G T C A C T G A C G T A
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGGGAATTCGAAA
-GGAAATTCCC--
 G T A C C T A G C T A G C T A G C G T A C G T A A C G T A C G T A G T C C T A G G T C A C T G A C G T A
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGGGAATTCGAAA----
--GGAAANTGAAACTNA
 G T A C C T A G C T A G C T A G C G T A C G T A A C G T A C G T A G T C C T A G G T C A C T G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CGGGAATTCGAAA
CWGGCGGGAA-------
 A C G T A C G T A C G T A C G T G T A C C T A G C T A G C T A G C G T A C G T A A C G T A C G T A G T C C T A G G T C A C T G A C G T A
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGGGAATTCGAAA
-GGAAATTCCC--
 G T A C C T A G C T A G C T A G C G T A C G T A A C G T A C G T A G T C C T A G G T C A C T G A C G T A
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CGGGAATTCGAAA
TTGACCGAGAATTCC---
 A C G T A C G T A C G T A C G T A C G T G T A C C T A G C T A G C T A G C G T A C G T A A C G T A C G T A G T C C T A G G T C A C T G A C G T A
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T A C G T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGGGAATTCGAAA-------
--GGAAAGCGAAACCAAAAC
 G T A C C T A G C T A G C T A G C G T A C G T A A C G T A C G T A G T C C T A G G T C A C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C