Information for 5-GCCGCAGCTTCCTCCC (Motif 12)

C T A G A G T C A G T C A T C G A G T C T C G A A T C G A G T C A C G T A G C T A G T C A G T C A C G T G T A C A G T C A T G C
Reverse Opposite:
A T C G A C T G A C T G C G T A A C T G A C T G T C G A C G T A A C T G A T G C A G C T A C T G A T G C C T A G C T A G G A T C
p-value:1e-9
log p-value:-2.219e+01
Information Content per bp:1.833
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.0 +/- 22.8bp
Average Position of motif in Background44.3 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:GCCGCAGCTTCCTCCC
------GGTCCCGCCC
 C T A G A G T C A G T C A T C G A G T C T C G A A T C G A G T C A C G T A G C T A G T C A G T C A C G T G T A C A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCCGCAGCTTCCTCCC
-CAGCTGTTTCCT---
 C T A G A G T C A G T C A T C G A G T C T C G A A T C G A G T C A C G T A G C T A G T C A G T C A C G T G T A C A G T C A T G C
A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GCCGCAGCTTCCTCCC
------GCTTCC----
 C T A G A G T C A G T C A T C G A G T C T C G A A T C G A G T C A C G T A G C T A G T C A G T C A C G T G T A C A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCCGCAGCTTCCTCCC
--CGCAGCTGCG----
 C T A G A G T C A G T C A T C G A G T C T C G A A T C G A G T C A C G T A G C T A G T C A G T C A C G T G T A C A G T C A T G C
A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCCGCAGCTTCCTCCC---
---CCGTCTTCCCCCTCAC
 C T A G A G T C A G T C A T C G A G T C T C G A A T C G A G T C A C G T A G C T A G T C A G T C A C G T G T A C A G T C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCCGCAGCTTCCTCCC
----NNAYTTCCTGHN
 C T A G A G T C A G T C A T C G A G T C T C G A A T C G A G T C A C G T A G C T A G T C A G T C A C G T G T A C A G T C A T G C
A C G T A C G T A C G T A C G T A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GCCGCAGCTTCCTCCC
------CNGTCCTCCC
 C T A G A G T C A G T C A T C G A G T C T C G A A T C G A G T C A C G T A G C T A G T C A G T C A C G T G T A C A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCCGCAGCTTCCTCCC
-NNGCAGCTGTC----
 C T A G A G T C A G T C A T C G A G T C T C G A A T C G A G T C A C G T A G C T A G T C A G T C A C G T G T A C A G T C A T G C
A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCCGCAGCTTCCTCCC
--TGCAGCTGTCCCT-
 C T A G A G T C A G T C A T C G A G T C T C G A A T C G A G T C A C G T A G C T A G T C A G T C A C G T G T A C A G T C A T G C
A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GCCGCAGCTTCCTCCC
------ACTTCCTGBT
 C T A G A G T C A G T C A T C G A G T C T C G A A T C G A G T C A C G T A G C T A G T C A G T C A C G T G T A C A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C A C G T A C G T A G T C A G T C A C G T A T C G A T C G G C A T