Information for 7-SARAGCCTGWWGA (Motif 11)

A T C G C G T A C T G A C G T A A C T G A G T C A T G C A C G T A C T G C G A T C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C C G A T C G T A A G T C C G T A A T C G A C T G A G T C A C G T A G C T A C G T A T G C
p-value:1e-9
log p-value:-2.219e+01
Information Content per bp:1.876
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.2 +/- 31.5bp
Average Position of motif in Background52.2 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-SARAGCCTGWWGA-
AGAGRRACAGCWGAC
 A C G T A T C G C G T A C T G A C G T A A C T G A G T C A T G C A C G T A C T G C G A T C G T A A C T G C G T A A C G T
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:SARAGCCTGWWGA
--AAGCTTG----
 A T C G C G T A C T G A C G T A A C T G A G T C A T G C A C G T A C T G C G A T C G T A A C T G C G T A
A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:SARAGCCTGWWGA
--CAGCC------
 A T C G C G T A C T G A C G T A A C T G A G T C A T G C A C G T A C T G C G A T C G T A A C T G C G T A
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:SARAGCCTGWWGA
-ACATCCTGNT--
 A T C G C G T A C T G A C G T A A C T G A G T C A T G C A C G T A C T G C G A T C G T A A C T G C G T A
A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.53
Offset:-10
Orientation:forward strand
Alignment:----------SARAGCCTGWWGA
GAGCCTGGTACTGWGCCTGR---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A C T G A C G T A A C T G A G T C A T G C A C G T A C T G C G A T C G T A A C T G C G T A
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G A C G T A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:SARAGCCTGWWGA--
ANCCACCTGTTGCNC
 A T C G C G T A C T G A C G T A A C T G A G T C A T G C A C G T A C T G C G A T C G T A A C T G C G T A A C G T A C G T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.52
Offset:5
Orientation:forward strand
Alignment:SARAGCCTGWWGA--
-----CCTGCTGAGH
 A T C G C G T A C T G A C G T A A C T G A G T C A T G C A C G T A C T G C G A T C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:SARAGCCTGWWGA-
---TGCCTGAGGCN
 A T C G C G T A C T G A C G T A A C T G A G T C A T G C A C G T A C T G C G A T C G T A A C T G C G T A A C G T
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:SARAGCCTGWWGA-
---AGCCTCAGGCA
 A T C G C G T A C T G A C G T A A C T G A G T C A T G C A C G T A C T G C G A T C G T A A C T G C G T A A C G T
A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.51
Offset:5
Orientation:forward strand
Alignment:SARAGCCTGWWGA
-----GCTGTG--
 A T C G C G T A C T G A C G T A A C T G A G T C A T G C A C G T A C T G C G A T C G T A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T