Information for 6-GCAGGCGGGGCAG (Motif 10)

A T C G A G T C C G T A A C T G A C T G A G T C A C T G A C T G A C T G C T A G A T G C C G T A A C T G
Reverse Opposite:
A G T C G C A T A T C G A G T C A G T C A G T C G T A C C T A G A G T C A G T C A C G T A C T G A T G C
p-value:1e-9
log p-value:-2.283e+01
Information Content per bp:1.892
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif22.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets50.9 +/- 28.0bp
Average Position of motif in Background43.2 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GCAGGCGGGGCAG
GGGNGGGGGCGGGGC--
 A C G T A C G T A C G T A C G T A T C G A G T C C G T A A C T G A C T G A G T C A C T G A C T G A C T G C T A G A T G C C G T A A C T G
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCAGGCGGGGCAG
GGGGGCGGGGC--
 A T C G A G T C C G T A A C T G A C T G A G T C A C T G A C T G A C T G C T A G A T G C C G T A A C T G
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCAGGCGGGGCAG
AGGGGGCGGGGCTG
 A C G T A T C G A G T C C G T A A C T G A C T G A G T C A C T G A C T G A C T G C T A G A T G C C G T A A C T G
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCAGGCGGGGCAG
GGGGGCGGGGCC-
 A T C G A G T C C G T A A C T G A C T G A G T C A C T G A C T G A C T G C T A G A T G C C G T A A C T G
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCAGGCGGGGCAG-
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A T C G A G T C C G T A A C T G A C T G A G T C A C T G A C T G A C T G C T A G A T G C C G T A A C T G A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCAGGCGGGGCAG
RGKGGGCGGAGC--
 A C G T A T C G A G T C C G T A A C T G A C T G A G T C A C T G A C T G A C T G C T A G A T G C C G T A A C T G
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCAGGCGGGGCAG
-CAGGTGAGG---
 A T C G A G T C C G T A A C T G A C T G A G T C A C T G A C T G A C T G C T A G A T G C C G T A A C T G
A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGCGGGGCAG
SDGCAGGTGCNS---
 A C G T A C G T A T C G A G T C C G T A A C T G A C T G A G T C A C T G A C T G A C T G C T A G A T G C C G T A A C T G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCAGGCGGGGCAG
RGKGGGCGKGGC--
 A C G T A T C G A G T C C G T A A C T G A C T G A G T C A C T G A C T G A C T G C T A G A T G C C G T A A C T G
C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGCGGGGCAG
NNCAGGTGNN----
 A C G T A T C G A G T C C G T A A C T G A C T G A G T C A C T G A C T G A C T G C T A G A T G C C G T A A C T G
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T