Information for 7-CGCTCCCGGGTGG (Motif 9)

A T G C C A T G A T G C G A C T A G T C A T G C G T A C A C T G A T C G T A C G G A C T A T C G T C A G
Reverse Opposite:
A G T C A T G C C T G A A T G C A T G C G T A C A C T G A T C G T C A G C T G A A T C G G A T C A T C G
p-value:1e-11
log p-value:-2.545e+01
Information Content per bp:1.750
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.60%
Number of Background Sequences with motif165.5
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets43.8 +/- 24.4bp
Average Position of motif in Background49.5 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0103.1_Zic3_1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CGCTCCCGGGTGG-
NCCCCCCCGGGGGGN
 A C G T A T G C C A T G A T G C G A C T A G T C A T G C G T A C A C T G A T C G T A C G G A C T A T C G T C A G A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CGCTCCCGGGTGG-
ACCCCCCCGGGGGGN
 A C G T A T G C C A T G A T G C G A C T A G T C A T G C G T A C A C T G A T C G T A C G G A C T A T C G T C A G A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------CGCTCCCGGGTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C A T G A T G C G A C T A G T C A T G C G T A C A C T G A T C G T A C G G A C T A T C G T C A G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0101.1_Zic1_1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CGCTCCCGGGTGG-
CACCCCCGGGGGGG
 A T G C C A T G A T G C G A C T A G T C A T G C G T A C A C T G A T C G T A C G G A C T A T C G T C A G A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CGCTCCCGGGTGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A T G C C A T G A T G C G A C T A G T C A T G C G T A C A C T G A T C G T A C G G A C T A T C G T C A G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGCTCCCGGGTGG
-GCTCCG------
 A T G C C A T G A T G C G A C T A G T C A T G C G T A C A C T G A T C G T A C G G A C T A T C G T C A G
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGCTCCCGGGTGG-----
-ANTNCCGGGGGGAANTT
 A T G C C A T G A T G C G A C T A G T C A T G C G T A C A C T G A T C G T A C G G A C T A T C G T C A G A C G T A C G T A C G T A C G T A C G T
A C G T C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

Gabpa/MA0062.2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGCTCCCGGGTGG
NCCACTTCCGG----
 A C G T A C G T A T G C C A T G A T G C G A C T A G T C A T G C G T A C A C T G A T C G T A C G G A C T A T C G T C A G
A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CGCTCCCGGGTGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A T G C C A T G A T G C G A C T A G T C A T G C G T A C A C T G A T C G T A C G G A C T A T C G T C A G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

ELF4/MA0641.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGCTCCCGGGTGG
CACTTCCGGGTT-
 A T G C C A T G A T G C G A C T A G T C A T G C G T A C A C T G A T C G T A C G G A C T A T C G T C A G
G A T C T C G A A G T C C A G T G A C T G T A C A G T C A C T G A T C G C A T G C G A T G C A T A C G T