Information for 16-CCTTGACCGC (Motif 37)

A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C C T A G A G T C
Reverse Opposite:
A C T G A G T C A C T G A C T G A C G T A G T C C G T A G T C A A C T G A C T G
p-value:1e-4
log p-value:-1.083e+01
Information Content per bp:1.944
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif23.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets39.3 +/- 23.1bp
Average Position of motif in Background47.5 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGACCGC
TGACCTTGACCT-
 A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C C T A G A G T C
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGACCGC
TGACCTTGACCT-
 A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C C T A G A G T C
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CCTTGACCGC-----
TGTCGTGACCCCTTAAT
 A C G T A C G T A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C C T A G A G T C A C G T A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CCTTGACCGC-----
NNNNTTGACCCCTNNNN
 A C G T A C G T A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C C T A G A G T C A C G T A C G T A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:CCTTGACCGC-
---TGACCYCT
 A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C C T A G A G T C A C G T
A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:6
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CCTTGACCGC-----
NNANTTGACCCCTNNNN
 A C G T A C G T A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C C T A G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

PB0157.1_Rara_2/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CCTTGACCGC-----
NNCNTGACCCCGCTCT
 A C G T A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C C T A G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

NR2F1/MA0017.2/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CCTTGACCGC--
CNNTTGACCTTTG
 A C G T A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C C T A G A G T C A C G T A C G T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTGACCGC
GCTGACCTTGAACTN
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C C T A G A G T C
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCTTGACCGC
TGACCTTGAN---
 A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C C T A G A G T C
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T