Information for 13-TCCCTCCRKKSCACST (Motif 32)

A C G T A G T C A G T C A G T C C G A T A G T C A G T C C T G A A C T G C A G T A T G C A G T C C G T A A G T C A T G C A C G T
Reverse Opposite:
C G T A A T C G A C T G A C G T A C T G A T C G G T A C G T A C A G C T A C T G A C T G C G T A A C T G A C T G A C T G C G T A
p-value:1e-6
log p-value:-1.467e+01
Information Content per bp:1.868
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.0 +/- 32.4bp
Average Position of motif in Background76.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6/MA0471.1/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCCCTCCRKKSCACST
NCTTCCCGCCC--------
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G A T A G T C A G T C C T G A A C T G C A G T A T G C A G T C C G T A A G T C A T G C A C G T
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TCCCTCCRKKSCACST
NYTTCCCGCC---------
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G A T A G T C A G T C C T G A A C T G C A G T A T G C A G T C C G T A A G T C A T G C A C G T
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TCCCTCCRKKSCACST
TTCCCGCCWG-------
 A C G T A C G T A G T C A G T C A G T C C G A T A G T C A G T C C T G A A C T G C A G T A T G C A G T C C G T A A G T C A T G C A C G T
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TCCCTCCRKKSCACST
NNTTCCCGCCC--------
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G A T A G T C A G T C C T G A A C T G C A G T A T G C A G T C C G T A A G T C A T G C A C G T
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TCCCTCCRKKSCACST
TTTCCCGCCMAV------
 A C G T A C G T A C G T A G T C A G T C A G T C C G A T A G T C A G T C C T G A A C T G C A G T A T G C A G T C C G T A A G T C A T G C A C G T
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:6
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TCCCTCCRKKSCACST
VDTTTCCCGCCA--------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G A T A G T C A G T C C T G A A C T G C A G T A T G C A G T C C G T A A G T C A T G C A C G T
T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:7
Score:0.52
Offset:10
Orientation:reverse strand
Alignment:TCCCTCCRKKSCACST--
----------GCACGTNC
 A C G T A G T C A G T C A G T C C G A T A G T C A G T C C T G A A C T G C A G T A T G C A G T C C G T A A G T C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:8
Score:0.52
Offset:10
Orientation:reverse strand
Alignment:TCCCTCCRKKSCACST--
----------GCACGTAY
 A C G T A G T C A G T C A G T C C G A T A G T C A G T C C T G A A C T G C A G T A T G C A G T C C G T A A G T C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TCCCTCCRKKSCACST
TGCCCNNAGGGCA---
 A C G T A G T C A G T C A G T C C G A T A G T C A G T C C T G A A C T G C A G T A T G C A G T C C G T A A G T C A T G C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:10
Score:0.51
Offset:9
Orientation:forward strand
Alignment:TCCCTCCRKKSCACST-
---------GCCACGTG
 A C G T A G T C A G T C A G T C C G A T A G T C A G T C C T G A A C T G C A G T A T G C A G T C C G T A A G T C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G