Information for 11-CCCCAACACACCATGA (Motif 31)

A G T C A T G C A G T C A G T C C G T A C T G A A G T C C G T A A G T C C G T A A G T C A G T C C T G A A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A G C T A C T G A C T G A C G T A C T G A C G T A C T G A G C T C G A T A C T G A C T G A T C G A C T G
p-value:1e-6
log p-value:-1.467e+01
Information Content per bp:1.924
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.4 +/- 16.5bp
Average Position of motif in Background52.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCCCAACACACCATGA--
---GAGCACAGCAGGACA
 A G T C A T G C A G T C A G T C C G T A C T G A A G T C C G T A A G T C C G T A A G T C A G T C C T G A A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CCCCAACACACCATGA
----ATCACCCCAT--
 A G T C A T G C A G T C A G T C C G T A C T G A A G T C C G T A A G T C C G T A A G T C A G T C C T G A A C G T A C T G C G T A
A C G T A C G T A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCCCAACACACCATGA--
---CCACACAGCAGGAGA
 A G T C A T G C A G T C A G T C C G T A C T G A A G T C C G T A A G T C C G T A A G T C A G T C C T G A A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

RREB1/MA0073.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCCCAACACACCATGA----
CCCCAAACCACCCCCCCCCA
 A G T C A T G C A G T C A G T C C G T A C T G A A G T C C G T A A G T C C G T A A G T C A G T C C T G A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

SREBF2/MA0596.1/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CCCCAACACACCATGA
----ATCACCCCAT--
 A G T C A T G C A G T C A G T C C G T A C T G A A G T C C G T A A G T C C G T A A G T C A G T C C T G A A C G T A C T G C G T A
A C G T A C G T A C G T A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCCCAACACACCATGA--
---CCACACAGCAGGAGA
 A G T C A T G C A G T C A G T C C G T A C T G A A G T C C G T A A G T C C G T A A G T C A G T C C T G A A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

SREBF1/MA0595.1/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CCCCAACACACCATGA
----ATCACCCCAC--
 A G T C A T G C A G T C A G T C C G T A C T G A A G T C C G T A A G T C C G T A A G T C A G T C C T G A A C G T A C T G C G T A
A C G T A C G T A C G T A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CCCCAACACACCATGA
--CNGTCACGCCAC--
 A G T C A T G C A G T C A G T C C G T A C T G A A G T C C G T A A G T C C G T A A G T C A G T C C T G A A C G T A C T G C G T A
A C G T A C G T G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CCCCAACACACCATGA
CRCCCACGCA------
 A G T C A T G C A G T C A G T C C G T A C T G A A G T C C G T A A G T C C G T A A G T C A G T C C T G A A C G T A C T G C G T A
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CCCCAACACACCATGA--
--GCAGCCAAGCGTGACN
 A G T C A T G C A G T C A G T C C G T A C T G A A G T C C G T A A G T C C G T A A G T C A G T C C T G A A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C