p-value: | 1e-13 |
log p-value: | -3.122e+01 |
Information Content per bp: | 1.856 |
Number of Target Sequences with motif | 14.0 |
Percentage of Target Sequences with motif | 2.12% |
Number of Background Sequences with motif | 50.7 |
Percentage of Background Sequences with motif | 0.11% |
Average Position of motif in Targets | 56.5 +/- 27.8bp |
Average Position of motif in Background | 52.6 +/- 30.3bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Hoxa9/MA0594.1/Jaspar
Match Rank: | 1 |
Score: | 0.95 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGATTTATGG- TGATTTATGGC |
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Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer
Match Rank: | 2 |
Score: | 0.94 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGATTTATGG-- TGATTTATGGCC |
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Hoxc9/MA0485.1/Jaspar
Match Rank: | 3 |
Score: | 0.93 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGATTTATGG-- NTGATTTATGGCC |
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HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer
Match Rank: | 4 |
Score: | 0.92 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGATTTATGG-- TGATTTATGGCC |
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Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
Match Rank: | 5 |
Score: | 0.84 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGATTTATGG TGATTGATGA |
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CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
Match Rank: | 6 |
Score: | 0.84 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGATTTATGG-- DGWTTTATGRCN |
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Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer
Match Rank: | 7 |
Score: | 0.80 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGATTTATGG-- TGATTRATGGCY |
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CDX1/MA0878.1/Jaspar
Match Rank: | 8 |
Score: | 0.77 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGATTTATGG- --TTTTATTGC |
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CDX2/MA0465.1/Jaspar
Match Rank: | 9 |
Score: | 0.76 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGATTTATGG--- --TTTTATGGCTN |
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HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
Match Rank: | 10 |
Score: | 0.76 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGATTTATGG- ATGATKGATGRC |
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