Information for 2-CGCCACCTGGTGG (Motif 6)

G A T C C A T G A G T C A G T C T G C A A G T C A G T C G C A T A C T G A T C G A G C T A C T G C A T G
Reverse Opposite:
G A T C A G T C C T G A A T G C A G T C C G T A A C T G C T A G A C G T A C T G A C T G G T A C C T A G
p-value:1e-12
log p-value:-2.894e+01
Information Content per bp:1.800
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.23%
Number of Background Sequences with motif62.9
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets41.2 +/- 15.9bp
Average Position of motif in Background48.4 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.89
Offset:-6
Orientation:forward strand
Alignment:------CGCCACCTGGTGG-
CNNBRGCGCCCCCTGSTGGC
A C G T A C G T A C G T A C G T A C G T A C G T G A T C C A T G A G T C A G T C T G C A A G T C A G T C G C A T A C T G A T C G A G C T A C T G C A T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.87
Offset:-3
Orientation:reverse strand
Alignment:---CGCCACCTGGTGG---
TAGCGCCCCCTGGTGGCCA
A C G T A C G T A C G T G A T C C A T G A G T C A G T C T G C A A G T C A G T C G C A T A C T G A T C G A G C T A C T G C A T G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.86
Offset:-4
Orientation:forward strand
Alignment:----CGCCACCTGGTGG---
ANAGTGCCACCTGGTGGCCA
A C G T A C G T A C G T A C G T G A T C C A T G A G T C A G T C T G C A A G T C A G T C G C A T A C T G A T C G A G C T A C T G C A T G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CGCCACCTGGTGG
-NNCACCTGNN--
G A T C C A T G A G T C A G T C T G C A A G T C A G T C G C A T A C T G A T C G A G C T A C T G C A T G
A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CGCCACCTGGTGG
-ACCACCTGTT--
G A T C C A T G A G T C A G T C T G C A A G T C A G T C G C A T A C T G A T C G A G C T A C T G C A T G
A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CGCCACCTGGTGG
-GCCATCTGTT--
G A T C C A T G A G T C A G T C T G C A A G T C A G T C G C A T A C T G A T C G A G C T A C T G C A T G
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CGCCACCTGGTGG--
GGCCYCCTGCTGDGH
G A T C C A T G A G T C A G T C T G C A A G T C A G T C G C A T A C T G A T C G A G C T A C T G C A T G A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CGCCACCTGGTGG
SNGCACCTGCHS-
G A T C C A T G A G T C A G T C T G C A A G T C A G T C G C A T A C T G A T C G A G C T A C T G C A T G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CGCCACCTGGTGG-
--CCCCCTGCTGTG
G A T C C A T G A G T C A G T C T G C A A G T C A G T C G C A T A C T G A T C G A G C T A C T G C A T G A C G T
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0101.1_Zic1_1/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGCCACCTGGTGG-
CACCCCCGGGGGGG
G A T C C A T G A G T C A G T C T G C A A G T C A G T C G C A T A C T G A T C G A G C T A C T G C A T G A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G