Information for 8-CCGTCTTTCT (Motif 28)

A G T C G T A C A T C G A G C T A G T C A G C T A C G T A C G T G T A C A C G T
Reverse Opposite:
C G T A A C T G T G C A C G T A C T G A A C T G C T G A T A G C A C T G C T A G
p-value:1e-8
log p-value:-1.851e+01
Information Content per bp:1.848
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif164.2
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets46.5 +/- 25.4bp
Average Position of motif in Background43.7 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CCGTCTTTCT
----CTTTGT
 A G T C G T A C A T C G A G C T A G T C A G C T A C G T A C G T G T A C A C G T
A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CCGTCTTTCT
GCNGCCATCTTG--
 A C G T A C G T A C G T A C G T A G T C G T A C A T C G A G C T A G T C A G C T A C G T A C G T G T A C A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCGTCTTTCT---
---YCTTTGTTCC
 A G T C G T A C A T C G A G C T A G T C A G C T A C G T A C G T G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

PB0124.1_Gabpa_2/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCGTCTTTCT------
CCGTCTTCCCCCTCAC
 A G T C G T A C A T C G A G C T A G T C A G C T A C G T A C G T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCGTCTTTCT---
---CCWTTGTYYB
 A G T C G T A C A T C G A G C T A G T C A G C T A C G T A C G T G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCGTCTTTCT
VBSYGTCTGG--
 A C G T A C G T A G T C G T A C A T C G A G C T A G T C A G C T A C G T A C G T G T A C A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CCGTCTTTCT
TAAGGCGTCTTG--
 A C G T A C G T A C G T A C G T A G T C G T A C A T C G A G C T A G T C A G C T A C G T A C G T G T A C A C G T
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCGTCTTTCT--
NNGCACCTTTCTCC
 A C G T A C G T A G T C G T A C A T C G A G C T A G T C A G C T A C G T A C G T G T A C A C G T A C G T A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CCGTCTTTCT---
---CCTTTGTTTT
 A G T C G T A C A T C G A G C T A G T C A G C T A C G T A C G T G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

YY1(Zf)/Promoter/Homer

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CCGTCTTTCT
GCCGCCATCTTG--
 A C G T A C G T A C G T A C G T A G T C G T A C A T C G A G C T A G T C A G C T A C G T A C G T G T A C A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T