Information for 4-GTDACTTCACAGAVTG (Motif 5)

A T C G A C G T C T G A C G T A A T G C A G C T A C G T A G T C G C T A A G T C G T C A A T C G C T G A T A C G A C G T A C T G
Reverse Opposite:
A G T C G T C A A G T C A G C T A T G C A C G T A C T G C G A T A C T G C G T A C T G A A T C G C G A T G A C T C G T A A T G C
p-value:1e-12
log p-value:-2.788e+01
Information Content per bp:1.761
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 29.0bp
Average Position of motif in Background60.7 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRE(bZIP)/Promoter/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTDACTTCACAGAVTG
GTGACGTCACCG----
 A T C G A C G T C T G A C G T A A T G C A G C T A C G T A G T C G C T A A G T C G T C A A T C G C T G A T A C G A C G T A C T G
T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:2
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GTDACTTCACAGAVTG
-----TTMACACCTT-
 A T C G A C G T C T G A C G T A A T G C A G C T A C G T A G T C G C T A A G T C G T C A A T C G C T G A T A C G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GTDACTTCACAGAVTG
---HTTTCCCASG---
 A T C G A C G T C T G A C G T A A T G C A G C T A C G T A G T C G C T A A G T C G T C A A T C G C T G A T A C G A C G T A C T G
A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTDACTTCACAGAVTG
RTGACGTCAYCN----
 A T C G A C G T C T G A C G T A A T G C A G C T A C G T A G T C G C T A A G T C G T C A A T C G C T G A T A C G A C G T A C T G
T C G A G A C T A C T G C G T A A G T C T C A G G A C T T G A C C T G A A G C T G A T C A T C G A C G T A C G T A C G T A C G T

PB0004.1_Atf1_1/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GTDACTTCACAGAVTG
ACGATGACGTCATCGA---
 A C G T A C G T A C G T A T C G A C G T C T G A C G T A A T G C A G C T A C G T A G T C G C T A A G T C G T C A A T C G C T G A T A C G A C G T A C T G
C G T A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C C T A G C T G A A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GTDACTTCACAGAVTG--
---ATTTCCCAGVAKSCY
 A T C G A C G T C T G A C G T A A T G C A G C T A C G T A G T C G C T A A G T C G T C A A T C G C T G A T A C G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GTDACTTCACAGAVTG
ATGACGTCAYYN----
 A T C G A C G T C T G A C G T A A T G C A G C T A C G T A G T C G C T A A G T C G T C A A T C G C T G A T A C G A C G T A C T G
T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GTDACTTCACAGAVTG---
----GAGCACAGCAGGACA
 A T C G A C G T C T G A C G T A A T G C A G C T A C G T A G T C G C T A A G T C G T C A A T C G C T G A T A C G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:GTDACTTCACAGAVTG
------DCTCAGCAGG
 A T C G A C G T C T G A C G T A A T G C A G C T A C G T A G T C G C T A A G T C G T C A A T C G C T G A T A C G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GTDACTTCACAGAVTG---
----CCACACAGCAGGAGA
 A T C G A C G T C T G A C G T A A T G C A G C T A C G T A G T C G C T A A G T C G T C A A T C G C T G A T A C G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A