Information for 17-GAATACACAC (Motif 42)

A C T G G T C A C T G A A C G T C G T A A G T C C G T A A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C G T A C T G A C G T C G T A A G C T A C G T A G T C
p-value:1e-4
log p-value:-1.124e+01
Information Content per bp:1.941
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif20.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.3 +/- 28.8bp
Average Position of motif in Background55.4 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--GAATACACAC
TCCAATCCACA-
 A C G T A C G T A C T G G T C A C T G A A C G T C G T A A G T C C G T A A G T C C G T A A G T C
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GAATACACAC-
SSAATCCACANN
 A C G T A C T G G T C A C T G A A C G T C G T A A G T C C G T A A G T C C G T A A G T C A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------GAATACACAC-
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A C T G A A C G T C G T A A G T C C G T A A G T C C G T A A G T C A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

MF0005.1_Forkhead_class/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAATACACAC
AAATAAACA-
 A C T G G T C A C T G A A C G T C G T A A G T C C G T A A G T C C G T A A G T C
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GAATACACAC
--GTAAACA-
 A C T G G T C A C T G A A C G T C G T A A G T C C G T A A G T C C G T A A G T C
A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GAATACACAC
WWATRTAAACAN
 A C G T A C G T A C T G G T C A C T G A A C G T C G T A A G T C C G T A A G T C C G T A A G T C
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

FOXG1/MA0613.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GAATACACAC
--GTAAACAA
 A C T G G T C A C T G A A C G T C G T A A G T C C G T A A G T C C G T A A G T C
A C G T A C G T C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAATACACAC-
WWTRTAAACAVG
 A C G T A C T G G T C A C T G A A C G T C G T A A G T C C G T A A G T C C G T A A G T C A C G T
C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

TBX21/MA0690.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GAATACACAC---
---TTCACACCTT
 A C T G G T C A C T G A A C G T C G T A A G T C C G T A A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

PB0016.1_Foxj1_1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAATACACAC-----
AAAGTAAACAAAAATT
 A C G T A C T G G T C A C T G A A C G T C G T A A G T C C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T