Information for 17-CCTTCCTCTCSTATTC (Motif 28)

A T G C A G T C A G C T A G C T T A G C G A T C C G A T G A T C A C G T A G T C T A C G G A C T G T C A G A C T A G C T G A T C
Reverse Opposite:
C A T G C T G A C G T A A C G T C T G A A T G C T C A G C G T A C A T G C G T A C A T G A C T G C T G A C T G A T A C G T A C G
p-value:1e-8
log p-value:-1.878e+01
Information Content per bp:1.666
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif124.5
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets43.0 +/- 24.5bp
Average Position of motif in Background50.4 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCTTCCTCTCSTATTC
--TTCCTCT-------
 A T G C A G T C A G C T A G C T T A G C G A T C C G A T G A T C A C G T A G T C T A C G G A C T G T C A G A C T A G C T G A T C
A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCTTCCTCTCSTATTC
CACTTCCTCT-------
 A C G T A T G C A G T C A G C T A G C T T A G C G A T C C G A T G A T C A C G T A G T C T A C G G A C T G T C A G A C T A G C T G A T C
A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0106.1_Arid5a_2/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCTTCCTCTCSTATTC----
---TNNTTTCGTATTNNANN
 A T G C A G T C A G C T A G C T T A G C G A T C C G A T G A T C A C G T A G T C T A C G G A C T G T C A G A C T A G C T G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

ZNF263/MA0528.1/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CCTTCCTCTCSTATTC-
TCCTCCTCCCCCTCCTCCTCC
 A C G T A C G T A C G T A C G T A T G C A G T C A G C T A G C T T A G C G A T C C G A T G A T C A C G T A G T C T A C G G A C T G T C A G A C T A G C T G A T C A C G T
G A C T G A T C G A T C G A C T G A T C G A T C G A C T A G T C G A T C G A T C G A T C A G T C A G C T A G T C G T A C C G A T A T G C G T A C G A C T A G T C G A T C

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CCTTCCTCTCSTATTC
KGCCCTTCCCCA-------
 A C G T A C G T A C G T A T G C A G T C A G C T A G C T T A G C G A T C C G A T G A T C A C G T A G T C T A C G G A C T G T C A G A C T A G C T G A T C
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCTTCCTCTCSTATTC-
--TCACTTTCACTTTCN
 A T G C A G T C A G C T A G C T T A G C G A T C C G A T G A T C A C G T A G T C T A C G G A C T G T C A G A C T A G C T G A T C A C G T
A C G T A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CCTTCCTCTCSTATTC
ACTTCCTGTT------
 A T G C A G T C A G C T A G C T T A G C G A T C C G A T G A T C A C G T A G T C T A C G G A C T G T C A G A C T A G C T G A T C
T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CCTTCCTCTCSTATTC-----
TTTTACTTTCACTTTCACTTT
 A T G C A G T C A G C T A G C T T A G C G A T C C G A T G A T C A C G T A G T C T A C G G A C T G T C A G A C T A G C T G A T C A C G T A C G T A C G T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CCTTCCTCTCSTATTC
-TTCCCCCTAC-----
 A T G C A G T C A G C T A G C T T A G C G A T C C G A T G A T C A C G T A G T C T A C G G A C T G T C A G A C T A G C T G A T C
A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CCTTCCTCTCSTATTC-
--TCAGTTTCATTTTCC
 A T G C A G T C A G C T A G C T T A G C G A T C C G A T G A T C A C G T A G T C T A C G G A C T G T C A G A C T A G C T G A T C A C G T
A C G T A C G T C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C