Information for 13-RGYTCACAGSCYT (Motif 27)

C T G A A C T G A G C T A C G T A G T C C G T A A G T C C G T A A C T G A T G C G T A C A G T C C G A T
Reverse Opposite:
C G T A C T A G A C T G A T C G A G T C A C G T A C T G A C G T A C T G C G T A C T G A A G T C A G C T
p-value:1e-8
log p-value:-1.964e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif8.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets64.0 +/- 27.0bp
Average Position of motif in Background47.9 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:RGYTCACAGSCYT
----CACAGN---
 C T G A A C T G A G C T A C G T A G T C C G T A A G T C C G T A A C T G A T G C G T A C A G T C C G A T
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:RGYTCACAGSCYT
--TTGACAGC---
 C T G A A C T G A G C T A C G T A G T C C G T A A G T C C G T A A C T G A T G C G T A C A G T C C G A T
A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:RGYTCACAGSCYT
ACATCAAAGG---
 C T G A A C T G A G C T A C G T A G T C C G T A A G T C C G T A A C T G A T G C G T A C A G T C C G A T
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-RGYTCACAGSCYT
NAGGTCANTGACCT
 A C G T C T G A A C T G A G C T A C G T A G T C C G T A A G T C C G T A A C T G A T G C G T A C A G T C C G A T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:RGYTCACAGSCYT
ACWTCAAAGG---
 C T G A A C T G A G C T A C G T A G T C C G T A A G T C C G T A A C T G A T G C G T A C A G T C C G A T
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--RGYTCACAGSCYT
GGTGYTGACAGS---
 A C G T A C G T C T G A A C T G A G C T A C G T A G T C C G T A A G T C C G T A A C T G A T G C G T A C A G T C C G A T
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--RGYTCACAGSCYT
AGAGTCCAAAGTCCA
 A C G T A C G T C T G A A C T G A G C T A C G T A G T C C G T A A G T C C G T A A C T G A T G C G T A C A G T C C G A T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:RGYTCACAGSCYT
ACATCAAAGGNA-
 C T G A A C T G A G C T A C G T A G T C C G T A A G T C C G T A A C T G A T G C G T A C A G T C C G A T
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:RGYTCACAGSCYT
-VBTGWCAGCB--
 C T G A A C T G A G C T A C G T A G T C C G T A A G T C C G T A A C T G A T G C G T A C A G T C C G A T
A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--RGYTCACAGSCYT
AAAGATCAAAGGAA-
 A C G T A C G T C T G A A C T G A G C T A C G T A G T C C G T A A G T C C G T A A C T G A T G C G T A C A G T C C G A T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T