Information for 15-CGCCCAAGTGACATGT (Motif 25)

A G T C A C T G A G T C G T A C G T A C C T G A C G T A A C T G A C G T A C T G C G T A A T G C C T G A A C G T A C T G A G C T
Reverse Opposite:
C T G A A G T C C G T A A G C T A T C G A C G T A G T C C G T A A G T C A C G T A G C T A C T G A C T G A C T G G T A C A C T G
p-value:1e-8
log p-value:-2.014e+01
Information Content per bp:1.915
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.8 +/- 31.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF1/MA0093.2/Jaspar

Match Rank:1
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CGCCCAAGTGACATGT
--GCCACGTGACC---
 A G T C A C T G A G T C G T A C G T A C C T G A C G T A A C T G A C G T A C T G C G T A A T G C C T G A A C G T A C T G A G C T
A C G T A C G T T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CGCCCAAGTGACATGT
--KCCACGTGAC----
 A G T C A C T G A G T C G T A C G T A C C T G A C G T A A C T G A C G T A C T G C G T A A T G C C T G A A C G T A C T G A G C T
A C G T A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGCCCAAGTGACATGT
CGACCAACTGCCGTG-
 A G T C A C T G A G T C G T A C G T A C C T G A C G T A A C T G A C G T A C T G C G T A A T G C C T G A A C G T A C T G A G C T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G A C G T

PH0086.1_Irx5/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CGCCCAAGTGACATGT------
-----AATATACATGTAAAATT
 A G T C A C T G A G T C G T A C G T A C C T G A C G T A A C T G A C G T A C T G C G T A A T G C C T G A A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

PB0149.1_Myb_2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGCCCAAGTGACATGT
CGACCAACTGCCATGC
 A G T C A C T G A G T C G T A C G T A C C T G A C G T A A C T G A C G T A C T G C G T A A T G C C T G A A C G T A C T G A G C T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

USF2/MA0526.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CGCCCAAGTGACATGT
--GTCATGTGACC---
 A G T C A C T G A G T C G T A C G T A C C T G A C G T A A C T G A C G T A C T G C G T A A T G C C T G A A C G T A C T G A G C T
A C G T A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T A C G T A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CGCCCAAGTGACATGT
--ACCACGTGAC----
 A G T C A C T G A G T C G T A C G T A C C T G A C G T A A C T G A C G T A C T G C G T A A T G C C T G A A C G T A C T G A G C T
A C G T A C G T T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T A C G T A C G T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CGCCCAAGTGACATGT------
-----AATATACATGTAATATA
 A G T C A C T G A G T C G T A C G T A C C T G A C G T A A C T G A C G T A C T G C G T A A T G C C T G A A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0082.1_Irx2/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CGCCCAAGTGACATGT------
-----TAAATACATGTAAAATT
 A G T C A C T G A G T C G T A C G T A C C T G A C G T A A C T G A C G T A C T G C G T A A T G C C T G A A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CGCCCAAGTGACATGT----
----NNATTGACAGGTGCTT
 A G T C A C T G A G T C G T A C G T A C C T G A C G T A A C T G A C G T A C T G C G T A A T G C C T G A A C G T A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T