Information for 20-CGCCCTCTCACAG (Motif 27)

A G T C A C T G A G T C A G T C A G T C A C G T A G T C A C G T A G T C G T C A A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T C T A G A C G T A C T G C G T A A C T G C G T A A C T G C T A G A C T G A G T C A C T G
p-value:1e-7
log p-value:-1.752e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.8 +/- 26.1bp
Average Position of motif in Background27.4 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0010.1_Egr1_1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CGCCCTCTCACAG
TCCGCCCCCGCATT-
A C G T A C G T A G T C A C T G A G T C A G T C A G T C A C G T A G T C A C G T A G T C G T C A A G T C C G T A A C T G
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CGCCCTCTCACAG
CRCCCACGCA---
A G T C A C T G A G T C A G T C A G T C A C G T A G T C A C G T A G T C G T C A A G T C C G T A A C T G
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T A C G T

EGR3/MA0732.1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGCCCTCTCACAG
CTACGCCCACGCACT-
A C G T A C G T A C G T A G T C A C T G A G T C A G T C A G T C A C G T A G T C A C G T A G T C G T C A A G T C C G T A A C T G
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T A C G T

EGR4/MA0733.1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CGCCCTCTCACAG
TTACGCCCACGCATTT
A C G T A C G T A C G T A G T C A C T G A G T C A G T C A G T C A C G T A G T C A C G T A G T C G T C A A G T C C G T A A C T G
G A C T G A C T G T C A A G T C C A T G A G T C T G A C A G T C G T C A A G T C A T C G A G T C T G C A G C A T G C A T G C A T

INSM1/MA0155.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGCCCTCTCACAG
CGCCCCCTGACA-
A G T C A C T G A G T C A G T C A G T C A C G T A G T C A C G T A G T C G T C A A G T C C G T A A C T G
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CGCCCTCTCACAG
GGTCCCGCCCCCTTCTC-
A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C A G T C A C G T A G T C A C G T A G T C G T C A A G T C C G T A A C T G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGCCCTCTCACAG
YCCGCCCACGCN---
A C G T A C G T A G T C A C T G A G T C A G T C A G T C A C G T A G T C A C G T A G T C G T C A A G T C C G T A A C T G
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGCCCTCTCACAG
ACGCCCACGCA---
A C G T A G T C A C T G A G T C A G T C A G T C A C G T A G T C A C G T A G T C G T C A A G T C C G T A A C T G
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CGCCCTCTCACAG
CCCCCGCCCCCGCC---
A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C A G T C A C G T A G T C A C G T A G T C G T C A A G T C C G T A A C T G
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CGCCCTCTCACAG-
CNNBRGCGCCCCCTGSTGGC
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C A G T C A C G T A G T C A C G T A G T C G T C A A G T C C G T A A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C