Information for 16-GKCCMCGCCTYKYAGG (Motif 23)

A C T G A C T G G T A C A G T C G T A C A G T C A C T G A G T C A G T C A C G T A G C T A C G T A G C T C G T A A C T G A T C G
Reverse Opposite:
A T G C A G T C A C G T T C A G G T C A T C G A C G T A A C T G A C T G A G T C C T A G A C T G A C T G A C T G G T A C A G T C
p-value:1e-8
log p-value:-1.852e+01
Information Content per bp:1.860
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif10.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.5 +/- 20.5bp
Average Position of motif in Background48.7 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GKCCMCGCCTYKYAGG
NNGGCCACGCCTTTN---
 A C G T A C G T A C T G A C T G G T A C A G T C G T A C A G T C A C T G A G T C A G T C A C G T A G C T A C G T A G C T C G T A A C T G A T C G
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GKCCMCGCCTYKYAGG
GGCCCCGCCCCC----
 A C T G A C T G G T A C A G T C G T A C A G T C A C T G A G T C A G T C A C G T A G C T A C G T A G C T C G T A A C T G A T C G
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GKCCMCGCCTYKYAGG
TCGACCCCGCCCCTAT--
 A C G T A C G T A C T G A C T G G T A C A G T C G T A C A G T C A C T G A G T C A G T C A C G T A G C T A C G T A G C T C G T A A C T G A T C G
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GKCCMCGCCTYKYAGG
GGCCACRCCCMK----
 A C T G A C T G G T A C A G T C G T A C A G T C A C T G A G T C A G T C A C G T A G C T A C G T A G C T C G T A A C T G A T C G
C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T A C G T A C G T A C G T

Klf12/MA0742.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GKCCMCGCCTYKYAGG
GACCACGCCCTTATT-
 A C T G A C T G G T A C A G T C G T A C A G T C A C T G A G T C A G T C A C G T A G C T A C G T A G C T C G T A A C T G A T C G
C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T A C G T

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GKCCMCGCCTYKYAGG
NAGCCCCGCCCCCN---
 A C G T A C T G A C T G G T A C A G T C G T A C A G T C A C T G A G T C A G T C A C G T A G C T A C G T A G C T C G T A A C T G A T C G
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GKCCMCGCCTYKYAGG
TACGCCCCGCCACTCTG-
 A C G T A C G T A C T G A C T G G T A C A G T C G T A C A G T C A C T G A G T C A G T C A C G T A G C T A C G T A G C T C G T A A C T G A T C G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T

SP2/MA0516.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GKCCMCGCCTYKYAGG
-GCCCCGCCCCCTCCC
 A C T G A C T G G T A C A G T C G T A C A G T C A C T G A G T C A G T C A C G T A G C T A C G T A G C T C G T A A C T G A T C G
A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GKCCMCGCCTYKYAGG
-GCCMCRCCCH-----
 A C T G A C T G G T A C A G T C G T A C A G T C A C T G A G T C A G T C A C G T A G C T A C G T A G C T C G T A A C T G A T C G
A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T A C G T A C G T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GKCCMCGCCTYKYAGG
-GCCCCGCCCCC----
 A C T G A C T G G T A C A G T C G T A C A G T C A C T G A G T C A G T C A C G T A G C T A C G T A G C T C G T A A C T G A T C G
A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T A C G T