Information for 12-CACACAGCATACT (Motif 17)

A G T C C G T A A G T C C G T A A G T C C G T A C T A G A G T C C T G A C G A T C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T C G T A A G C T C T A G A G T C A C G T A C T G A C G T A C T G A C G T A C T G
p-value:1e-8
log p-value:-2.028e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.4 +/- 29.0bp
Average Position of motif in Background68.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CACACAGCATACT
CGAAGCACACAAAATA--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C C G T A C T A G A G T C C T G A C G A T C G T A A G T C A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T A C G T

ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CACACAGCATACT--------
TGCCNACCWAGAATACTDTATCMAR
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C C G T A C T A G A G T C C T G A C G A T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C A T G G A T C G T A C G A T C C T G A A T G C G A T C C G T A C T G A C T A G T G C A T G C A A C G T C G T A A G T C G A C T C G A T C G A T T C G A G A C T G A T C T G A C C G T A C T A G

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CACACAGCATACT
--CACAGN-----
 A G T C C G T A A G T C C G T A A G T C C G T A C T A G A G T C C T G A C G A T C G T A A G T C A C G T
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CACACAGCATACT-
GAGCACAGCAGGACA
 A C G T A G T C C G T A A G T C C G T A A G T C C G T A C T A G A G T C C T G A C G A T C G T A A G T C A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CACACAGCATACT
-ACAAAGGNBCCT
 A G T C C G T A A G T C C G T A A G T C C G T A C T A G A G T C C T G A C G A T C G T A A G T C A C G T
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CACACAGCATACT-
CCACACAGCAGGAGA
 A C G T A G T C C G T A A G T C C G T A A G T C C G T A C T A G A G T C C T G A C G A T C G T A A G T C A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

SOX8/MA0868.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CACACAGCATACT---
AACACTGCACATTGTT
 A G T C C G T A A G T C C G T A A G T C C G T A C T A G A G T C C T G A C G A T C G T A A G T C A C G T A C G T A C G T A C G T
C T G A C G T A A G T C G T C A G T A C A C G T T A C G T G A C C G T A G A T C G T C A A C G T A G C T A C T G A C G T C G A T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CACACAGCATACT-
CCACACAGCAGGAGA
 A C G T A G T C C G T A A G T C C G T A A G T C C G T A C T A G A G T C C T G A C G A T C G T A A G T C A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CACACAGCATACT
-ACAAAG------
 A G T C C G T A A G T C C G T A A G T C C G T A C T A G A G T C C T G A C G A T C G T A A G T C A C G T
A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CACACAGCATACT-
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C C G T A C T A G A G T C C T G A C G A T C G T A A G T C A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G